RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 OR51D1Q8NGF3 324 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 OR5H6Q8NGV6 325 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 OR8S1Q8NH09 359 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 TMEM171Q8WVE6 324 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 SLC25A28Q96A46 364 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 RFT1Q96AA3 541 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 CMTM3Q96MX0 182 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 NKX3-1Q99801 234 aaPredicted RBP11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 SLC22A4Q9H015 551 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 NPDC1Q9NQX5 325 aaPredicted RBP11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 CRIM1Q9NZV1 1036 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 OR5V1Q9UGF6 321 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 MRPS28Q9Y2Q9 187 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 ETV7Q9Y603 341 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 STAB1Q9NY15 2570 aa11.16□□□□□ -0.62
SHKBP1-209ENST00000595803 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 LOC100289279A0A1B0GTE1 492 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 ZNF732B4DXR9 585 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 C19orf84I3L1E1 186 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 LILRA1O75019 489 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 IGHV3-13P01766 116 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 TMEM225BP0DP42 221 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 ARSBP15848 533 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 PTGFRP43088 359 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 SCAND1P57086 179 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 ZNF846Q147U1 533 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 OR8G1Q15617 311 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 AWAT2Q6E213 333 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 ADAM5Q6NVV9 412 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 GLIPR1L1Q6UWM5 242 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 LRP11Q86VZ4 500 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 OR4D6Q8NGJ1 314 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 OR13G1Q8NGZ3 307 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 LGALS14Q8TCE9 139 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 TNFAIP8L1Q8WVP5 186 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 OR5P3Q8WZ94 311 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 PIK3IP1Q96FE7 263 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 DIRAS2Q96HU8 199 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 SYT3Q9BQG1 590 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 RTL8AQ9BWD3 113 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 MIXL1Q9H2W2 232 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 ZNF442Q9H7R0 627 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 CA10Q9NS85 328 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 NKIRAS2Q9NYR9 191 aa11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 NSD1Q96L73 2696 aaPredicted RBP11.15□□□□□ -0.62
SHKBP1-209ENST00000595803 PRR14LQ5THK1 2151 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 PQLC2LA1A4F0 135 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 OR5B21A6NL26 309 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 CLDN25C9JDP6 229 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 BPNT1O95861 308 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 UBBP0CG47 229 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 TALDO1P37837 337 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 OR3A4PP47883 348 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 POU3F4P49335 361 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 GPM6AP51674 278 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 GNG3P63215 75 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 MZT1Q08AG7 82 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 SPANXN2Q5MJ10 180 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 RNF144BQ7Z419 303 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 TGIF2LYQ8IUE0 185 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 LAX1Q8IWV1 398 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 SPERTQ8NA61 448 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 OR5D18Q8NGL1 313 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 FAM222BQ8WU58 562 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 MRPL24Q96A35 216 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 WDFY2Q96P53 400 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 ELL3Q9HB65 397 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 HMG20AQ9NP66 347 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 TAAR3PQ9P1P4 343 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 MYEF2Q9P2K5 600 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 GHRLQ9UBU3 117 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 RNF115Q9Y4L5 304 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 HCFC1P51610 2035 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 CSPG4Q6UVK1 2322 aa11.14□□□□□ -0.63
SHKBP1-209ENST00000595803 PLSCR5A0PG75 271 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 FABP12A6NFH5 140 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 SHISA9B4DS77 424 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 CYB5AP00167 134 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 APOA1P02647 267 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 OR4A8P0C604 315 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 ELK1P19419 428 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 EVX1P49640 407 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 MMP15P51511 669 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 ZNF45Q02386 682 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 MSMPQ1L6U9 139 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 UBE2NLQ5JXB2 153 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 LRRC28Q86X40 367 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 ZNF573Q86YE8 665 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 HPSE2Q8WWQ2 592 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 DVL3Q92997 716 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 ITPKCQ96DU7 683 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 S100A16Q96FQ6 103 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 ADAT1Q9BUB4 502 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 MRPL37Q9BZE1 423 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 WDR12Q9GZL7 423 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 METTL9Q9H1A3 318 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 CXXC4Q9H2H0 198 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 PLK3Q9H4B4 646 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 PCDHB16Q9NRJ7 776 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms