RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 DEGS2Q6QHC5 323 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 KLHL24Q6TFL4 600 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 ZNF565Q8N9K5 539 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 OR51A2Q8NGJ7 313 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 OR2AJ1Q8NGZ0 328 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 OR14L1PQ8NHC6 308 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 ZNF775Q96BV0 537 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 RAB3CQ96E17 227 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 CPNE2Q96FN4 548 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 SEC22AQ96IW7 307 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 ZNF385AQ96PM9 386 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 SLC17A5Q9NRA2 495 aa15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 PHF3Q92576 2039 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-205ENST00000594973 A0A0J9YW62 118 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 SLC31A2O15432 143 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 RAB5AP20339 215 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 TAS2R60P59551 318 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 TMED6Q8WW62 240 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 NTNG2Q96CW9 530 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 THOC3Q96J01 351 aaKnown RBP15□□□□□ -0.01
SHKBP1-205ENST00000594973 CYTL1Q9NRR1 136 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 FAM206AQ9NX38 181 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 CACFD1Q9UGQ2 172 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 ZNF107Q9UII5 783 aaPredicted RBP15□□□□□ -0.01
SHKBP1-205ENST00000594973 DCDC2BA2VCK2 349 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 NPIPA2E9PIF3 369 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 NPIPA3F8WFD2 350 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 RER1O15258 196 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 TRAPPC6AO75865 159 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 ITGA3P26006 1051 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 POU3F4P49335 361 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 MMP16P51512 607 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 SPOCK1Q08629 439 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 RAB11BQ15907 218 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 ZNF239Q16600 458 aaKnown RBP15□□□□□ -0.01
SHKBP1-205ENST00000594973 C1QL4Q86Z23 238 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 FOXRED1Q96CU9 486 aaPredicted RBP15□□□□□ -0.01
SHKBP1-205ENST00000594973 C14orf144Q96I85 54 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 CDC6Q99741 560 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 CDV3Q9UKY7 258 aaKnown RBP15□□□□□ -0.01
SHKBP1-205ENST00000594973 PCSK5Q92824 1860 aa15□□□□□ -0.01
SHKBP1-205ENST00000594973 EP300Q09472 2414 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 TRAV18A0A075B6X5 111 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 A0A1B0GV90 55 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 TLX3O43711 291 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 HLA-AP01891 365 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 PGAM2P15259 253 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 HSD11B1P28845 292 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 SLC6A9P48067 706 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 CYB561P49447 251 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 RAC1P63000 192 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 HIST3H3Q16695 136 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 DNLZQ5SXM8 178 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 CDCP2Q5VXM1 449 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 AWAT2Q6E213 333 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 SPINK14Q6IE38 97 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 LYG2Q86SG7 212 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 OR8S1Q8NH09 359 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 DVL3Q92997 716 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 SRXN1Q9BYN0 137 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 SLCO5A1Q9H2Y9 848 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 DEPPQ9NTK1 212 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 CGGBP1Q9UFW8 167 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 LOC102725191A0A1B0GVB3 256 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 FBXO24O75426 580 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 IL2RAP01589 272 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 ISG15P05161 165 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 SLC2A1P11166 492 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 ZNF17P17021 662 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 ACKR3P25106 362 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 CSNK2A1P68400 391 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 GABREP78334 506 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 RELQ04864 619 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 C2orf76Q3KRA6 126 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 PSMF1Q92530 271 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 FAM3DQ96BQ1 224 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 MICU1Q9BPX6 476 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 PBOV1Q9GZY1 135 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 TMEM9BQ9NQ34 198 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 RPS10P5Q9NQ39 176 aa14.99□□□□□ -0.01
SHKBP1-205ENST00000594973 CCDC187A0A096LP49 1063 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 SLC17A2O00624 439 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 CCSO14618 274 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 ZBTB25P24278 435 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 PSMB6P28072 239 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 CSNK1A1P48729 337 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 RBP2P50120 134 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 SPEM2Q0P670 501 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 PHYHD1Q5SRE7 291 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 GLYATL3Q5SZD4 288 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 REC114Q7Z4M0 266 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 JAGN1Q8N5M9 183 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 RNASE11Q8TAA1 199 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 MITD1Q8WV92 249 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 SELENOIQ9C0D9 397 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 HRH4Q9H3N8 390 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 METTL21EPA6NDL7 271 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 FAM157AC9JC47 383 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 TTRP02766 147 aa14.98□□□□□ -0.01
SHKBP1-205ENST00000594973 HOXB5P09067 269 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms