RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 SDSLQ96GA7 329 aa10.89□□□□□ -0.67
APOC1-209ENST00000592885 OR8B4Q96RC9 309 aa10.89□□□□□ -0.67
APOC1-209ENST00000592885 CNN2Q99439 309 aaKnown RBP10.89□□□□□ -0.67
APOC1-209ENST00000592885 TEAD3Q99594 435 aa10.89□□□□□ -0.67
APOC1-209ENST00000592885 PBOV1Q9GZY1 135 aa10.89□□□□□ -0.67
APOC1-209ENST00000592885 MMP27Q9H306 513 aa10.89□□□□□ -0.67
APOC1-209ENST00000592885 C16orf95Q9H693 158 aa10.89□□□□□ -0.67
APOC1-209ENST00000592885 SNTG1Q9NSN8 517 aa10.89□□□□□ -0.67
APOC1-209ENST00000592885 TVP23BQ9NYZ1 205 aa10.89□□□□□ -0.67
APOC1-209ENST00000592885 ENPP5Q9UJA9 477 aa10.89□□□□□ -0.67
APOC1-209ENST00000592885 ZNF222Q9UK12 451 aa10.89□□□□□ -0.67
APOC1-209ENST00000592885 IGKV1D-17A0A075B6S4 117 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 A0A1W2PQ09 198 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 SLC22A31A6NKX4 558 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 ZNF732B4DXR9 585 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 GSC2O15499 205 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 KCNAB3O43448 404 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 DHRS3O75911 302 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 PAHP00439 452 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 NDUFB7P17568 137 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 PRKACGP22612 351 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 GMFBP60983 142 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 ACTR3P61158 418 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 TAF9Q16594 264 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 SMIM21Q3B7S5 101 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 TMEM236Q5W0B7 351 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 PLCXD3Q63HM9 321 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 AQP3Q92482 292 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 GPR84Q9NQS5 396 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 POMPQ9Y244 141 aa10.88□□□□□ -0.67
APOC1-209ENST00000592885 A0A1W2PPH5 198 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 DHRS7CA6NNS2 312 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 RHBDL1O75783 438 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 DNAJC8O75937 253 aaPredicted RBP10.87□□□□□ -0.67
APOC1-209ENST00000592885 TSPAN9O75954 239 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 MRPL3P09001 348 aaKnown RBP10.87□□□□□ -0.67
APOC1-209ENST00000592885 PSG2P11465 335 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 SAA4P35542 130 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 TGFBR2P37173 567 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 GABRA2P47869 451 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 KLRD1Q13241 179 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 PTGES3Q15185 160 aaKnown RBP10.87□□□□□ -0.67
APOC1-209ENST00000592885 MIDNQ504T8 468 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 PDLIM3Q53GG5 364 aaPredicted RBP10.87□□□□□ -0.67
APOC1-209ENST00000592885 CEP78Q5JTW2 689 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 ZNF684Q5T5D7 378 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 Q6ZSV7 163 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 ZNF573Q86YE8 665 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 POC1AQ8NBT0 407 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 TMEM185AQ8NFB2 350 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 OR51E1Q8TCB6 317 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 ENOPH1Q9UHY7 261 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 IKZF2Q9UKS7 526 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.87□□□□□ -0.67
APOC1-209ENST00000592885 COPS3Q9UNS2 423 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 PIGLQ9Y2B2 252 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 POLDIP2Q9Y2S7 368 aa10.87□□□□□ -0.67
APOC1-209ENST00000592885 SF3B6Q9Y3B4 125 aaKnown RBP10.87□□□□□ -0.67
APOC1-209ENST00000592885 MEIOCA2RUB1 952 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 LOC110117498-PIK3R3F6TDL0 507 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 J3QT63 122 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 NOS1APO75052 506 aaPredicted RBP10.86□□□□□ -0.67
APOC1-209ENST00000592885 NRASP01111 189 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 TTRP02766 147 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 FAHP16930 419 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 HCCSP53701 268 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 EGR3Q06889 387 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 SRSF4Q08170 494 aaKnown RBP10.86□□□□□ -0.67
APOC1-209ENST00000592885 AANATQ16613 207 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 NXNL2Q5VZ03 156 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 TMEM42Q69YG0 159 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 HAGHLQ6PII5 290 aaPredicted RBP10.86□□□□□ -0.67
APOC1-209ENST00000592885 ACP7Q6ZNF0 438 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 MOB3CQ70IA8 216 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 MEPCEQ7L2J0 689 aaKnown RBP10.86□□□□□ -0.67
APOC1-209ENST00000592885 ZNF561Q8N587 486 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 BEND2Q8NDZ0 799 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 OR5K1Q8NHB7 308 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 UTP4Q969X6 686 aaKnown RBP10.86□□□□□ -0.67
APOC1-209ENST00000592885 DUS3LQ96G46 650 aaKnown RBP10.86□□□□□ -0.67
APOC1-209ENST00000592885 SEMA6AQ9H2E6 1030 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 MAB21L2Q9Y586 359 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 R4GMQ9 66 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 V9GYS6 101 aa10.86□□□□□ -0.67
APOC1-209ENST00000592885 PRR32B1ATL7 298 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 H0YAE9 185 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 PSMD9O00233 223 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 SLC1A7O00341 560 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 DLGAP1O14490 977 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 PRKYO43930 277 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 SRSF10O75494 262 aaKnown RBP10.85□□□□□ -0.67
APOC1-209ENST00000592885 PGA5P0DJD9 388 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 DAPP51397 102 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 DEFA6Q01524 100 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 MFGE8Q08431 387 aaPredicted RBP10.85□□□□□ -0.67
APOC1-209ENST00000592885 CLVS2Q5SYC1 327 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 BCL2L15Q5TBC7 163 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 SLX4IPQ5VYV7 408 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 ASPHD2Q6ICH7 369 aa10.85□□□□□ -0.67
APOC1-209ENST00000592885 C11orf88Q6PI97 169 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms