RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 A0A1W2PPV4 95 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 TMPRSS2O15393 492 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 CCNKO75909 580 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 GYPBP06028 91 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 CD34P28906 385 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 SMAGPQ0VAQ4 97 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FOXO1Q12778 655 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 HYAL4Q2M3T9 481 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 ADAM5Q6NVV9 412 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 KCTD9Q7L273 389 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM3DQ96BQ1 224 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 CTHRC1Q96CG8 243 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 SNX22Q96L94 193 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 SLC25A21Q9BQT8 299 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 GABARAPL3Q9BY60 117 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 ANKRD60Q9BZ19 345 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 NTNG1Q9Y2I2 539 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 RNF114Q9Y508 228 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 ALG5Q9Y673 324 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 MBD3L4A6NDZ8 208 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 MBD3L3A6NE82 208 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 MBD3L5A6NJ08 208 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 DFFBO76075 338 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 IFNA10P01566 189 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 RNASE12Q5GAN4 147 aaKnown RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 C22orf42Q6IC83 251 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 SAXO1Q8IYX7 474 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 FADS6Q8N9I5 356 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 MBD3L2Q8NHZ7 208 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 SLC25A28Q96A46 364 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 PERPQ96FX8 193 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 ZNF714Q96N38 554 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 ZNF446Q9NWS9 450 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 RHBDL2Q9NX52 303 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 INSIG2Q9Y5U4 225 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 AUP1Q9Y679 476 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 SDCBPO00560 298 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 TGFAP01135 160 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 THBDP07204 575 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 RPS25P62851 125 aaKnown RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 LTC4SQ16873 150 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 ATP1A1-AS1Q5TC04 95 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 RNLSQ5VYX0 342 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 TGIF2LYQ8IUE0 185 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 TGIF2LXQ8IUE1 241 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 ZNF561Q8N587 486 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 ZFP41Q8N8Y5 198 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 CMTM2Q8TAZ6 248 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 PLCXD1Q9NUJ7 323 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 TINAGQ9UJW2 476 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 A0A0U1RQV5 110 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 A8MXE2 369 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 CLEC3BP05452 202 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 ACAA1P09110 424 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 RAB6AP20340 208 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 VEGFCP49767 419 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 RAB9AP51151 201 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 GPM6AP51674 278 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 AKR1C1Q04828 323 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 MADCAM1Q13477 382 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 TSPO2Q5TGU0 170 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 OR4S2Q8NH73 311 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 CASTOR1Q8WTX7 329 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 GHSRQ92847 366 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 PFDN5Q99471 154 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 PLSCR4Q9NRQ2 329 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 CHCHD2Q9Y6H1 151 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 MYO16Q9Y6X6 1858 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 SIP14410 1827 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 DNASE2O00115 360 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 NOS1APO75052 506 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 TDGF1P13385 188 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 HIST1H1BP16401 226 aaKnown RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 CLDN6P56747 220 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 HNF4GQ14541 408 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 ANKRD55Q3KP44 614 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 AKR1C8PQ5T2L2 129 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 HES5Q5TA89 166 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 ZNF385CQ66K41 422 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-212ENST00000591126 STEAP1BQ6NZ63 245 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 CALHM3Q86XJ0 350 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 CELF2-AS1Q8N7Q2 184 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 LINC01560Q8TB33 94 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 BTF3L4Q96K17 158 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 OR2M2Q96R28 347 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 DCTN5Q9BTE1 182 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 PBDC1Q9BVG4 233 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 PRSS22Q9GZN4 317 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 NARFLQ9H6Q4 476 aa5.52□□□□□ -1.53
SMAD4-212ENST00000591126 SDK1Q7Z5N4 2213 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 TM4SF5O14894 197 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 LANCL1O43813 399 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 SC5DO75845 299 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 CAPNS1P04632 268 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 GLI4P10075 376 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 SRD5A1P18405 259 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 NPBWR1P48145 328 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 PPOXP50336 477 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 KDM4DQ6B0I6 523 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 OR52L2PQ8NGH6 319 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms