RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 INPP5EQ9NRR6 644 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 SNTG1Q9NSN8 517 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 ERICH4A6NGS2 130 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 DVL1O14640 695 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 GATBO75879 557 aaKnown RBP12.32□□□□□ -0.44
ATG4D-207ENST00000587256 CLIC3O95833 236 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 FSHBP01225 129 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 IGHA1P01876 353 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 HAAOP46952 286 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 ELF3P78545 371 aaPredicted RBP12.32□□□□□ -0.44
ATG4D-207ENST00000587256 PAX2Q02962 417 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 GALEQ14376 348 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 KLHL22Q53GT1 634 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 ZNF691Q5VV52 312 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 STUMQ69YW2 141 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 LHFPL3Q86UP9 236 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 ZNF573Q86YE8 665 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 SETD9Q8NE22 299 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 OR5T2Q8NGG2 359 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 ZNF671Q8TAW3 534 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 TRMT10AQ8TBZ6 339 aaKnown RBP12.32□□□□□ -0.44
ATG4D-207ENST00000587256 NPRL2Q8WTW4 380 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 AQP3Q92482 292 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 RASSF4Q9H2L5 321 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 VCXQ9H320 206 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 NLKQ9UBE8 527 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 KAAG1Q9UBP8 84 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 SLC7A11Q9UPY5 501 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 MYRFQ9Y2G1 1151 aa12.32□□□□□ -0.44
ATG4D-207ENST00000587256 KIR2DS1A0A191URI9 304 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 A0A1B0GW55 424 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 J3QT63 122 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 TNFRSF13BO14836 293 aaPredicted RBP12.31□□□□□ -0.44
ATG4D-207ENST00000587256 WBP4O75554 376 aaKnown RBP12.31□□□□□ -0.44
ATG4D-207ENST00000587256 DUX4L2P0CJ85 424 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 DUX4L3P0CJ86 424 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 DUX4L4P0CJ87 422 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 DUX4L5P0CJ88 424 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 DUX4L6P0CJ89 424 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 DUX4L7P0CJ90 424 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 ZNF20P17024 532 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 NANOS3P60323 173 aaKnown RBP12.31□□□□□ -0.44
ATG4D-207ENST00000587256 PAX8Q06710 450 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 IKZF1Q13422 519 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 SMN1Q16637 294 aaKnown RBP12.31□□□□□ -0.44
ATG4D-207ENST00000587256 OGFRL1Q5TC84 451 aaPredicted RBP12.31□□□□□ -0.44
ATG4D-207ENST00000587256 TMEM244Q5VVB8 128 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 DUX4L9Q6RFH8 374 aaPredicted RBP12.31□□□□□ -0.44
ATG4D-207ENST00000587256 Q6ZSR3 168 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 RDH10Q8IZV5 341 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 SYS1Q8N2H4 156 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 DHRSXQ8N5I4 330 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 OR52I1Q8NGK6 324 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 CNIH3Q8TBE1 160 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 C22orf15Q8WYQ4 148 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 DACT3Q96B18 629 aaPredicted RBP12.31□□□□□ -0.44
ATG4D-207ENST00000587256 TMIGD2Q96BF3 282 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 PELI1Q96FA3 418 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 SLC6A7Q99884 636 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 CHST5Q9GZS9 411 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 ERVK13-1Q9NX77 482 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 DUX4Q9UBX2 424 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 POLDIP2Q9Y2S7 368 aa12.31□□□□□ -0.44
ATG4D-207ENST00000587256 FBN1P35555 2871 aaKnown RBP12.3□□□□□ -0.44
ATG4D-207ENST00000587256 IGHV3OR16-10A0A075B7F0 116 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 TRAV40A0A0B4J280 105 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 FAM230AA0A1W2PPH8 454 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 PQLC2LA1A4F0 135 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 CASQ2O14958 399 aaPredicted RBP12.3□□□□□ -0.44
ATG4D-207ENST00000587256 NDUFB3O43676 98 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 SERPINA3P01011 423 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 FPR2P25090 351 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 CCR9P51686 369 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 FGF12P61328 243 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 CNN3Q15417 329 aaKnown RBP12.3□□□□□ -0.44
ATG4D-207ENST00000587256 SMIM21Q3B7S5 101 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 KRTAP24-1Q3LI83 254 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 LRRC10Q5BKY1 277 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 FDX2Q6P4F2 183 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 ZNF676Q8N7Q3 588 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 PNLDC1Q8NA58 520 aaKnown RBP12.3□□□□□ -0.44
ATG4D-207ENST00000587256 PP6455Q8WZ26 134 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 RNF166Q96A37 237 aaPredicted RBP12.3□□□□□ -0.44
ATG4D-207ENST00000587256 SUCNR1Q9BXA5 334 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 DNTTIP1Q9H147 329 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 DCLRE1BQ9H816 532 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 ISG20L2Q9H9L3 353 aaKnown RBP12.3□□□□□ -0.44
ATG4D-207ENST00000587256 FRRS1LQ9P0K9 344 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 NUP50Q9UKX7 468 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 DNHD1Q96M86 4753 aa12.3□□□□□ -0.44
ATG4D-207ENST00000587256 IRGMA1A4Y4 181 aa12.29□□□□□ -0.44
ATG4D-207ENST00000587256 OR2AT4A6NND4 320 aa12.29□□□□□ -0.44
ATG4D-207ENST00000587256 SYNGR1O43759 233 aa12.29□□□□□ -0.44
ATG4D-207ENST00000587256 ECDO95905 644 aaPredicted RBP12.29□□□□□ -0.44
ATG4D-207ENST00000587256 TFF1P04155 84 aa12.29□□□□□ -0.44
ATG4D-207ENST00000587256 OCM2P0CE71 109 aa12.29□□□□□ -0.44
ATG4D-207ENST00000587256 OCMP0CE72 109 aaPredicted RBP12.29□□□□□ -0.44
ATG4D-207ENST00000587256 PPIAL4GP0DN37 164 aa12.29□□□□□ -0.44
ATG4D-207ENST00000587256 SELLP14151 372 aa12.29□□□□□ -0.44
ATG4D-207ENST00000587256 GABRA2P47869 451 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms