RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 PRDX4Q13162 271 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 P2RY14Q15391 338 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 UBE2V2Q15819 145 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 ZBTB37Q5TC79 503 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 DDI2Q5TDH0 399 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 SNX29P2Q8IUI4 249 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 SERPINA12Q8IW75 414 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 CADM3Q8N126 398 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 BATF2Q8N1L9 274 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 JAGN1Q8N5M9 183 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 OR10AD1Q8NGE0 317 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 OR52N4Q8NGI2 321 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 OR5D18Q8NGL1 313 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 OR8S1Q8NH09 359 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 SETD6Q8TBK2 473 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 ITFG2Q969R8 447 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 ELMOD3Q96FG2 381 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 SLC22A4Q9H015 551 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 RAB1BQ9H0U4 201 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 ZCCHC4Q9H5U6 513 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 CRYBG3Q68DQ2 2970 aa9.32□□□□□ -0.92
TOP3A-216ENST00000583804 DCHS2Q6V1P9 2916 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 IGKV1-9A0A0C4DH69 117 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 A0A0G2JK05 382 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-216ENST00000583804 MLNRO43193 412 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 NRASP01111 189 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 IGHV1-46P01743 117 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 ERCC1P07992 297 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-216ENST00000583804 SNRPBP14678 240 aaKnown RBP9.31□□□□□ -0.92
TOP3A-216ENST00000583804 IGFBP3P17936 291 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-216ENST00000583804 RAB3AP20336 220 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 GALP22466 123 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 TNFSF4P23510 183 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 DNASE1P24855 282 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 RBMXP38159 391 aaKnown RBP9.31□□□□□ -0.92
TOP3A-216ENST00000583804 PPOXP50336 477 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 TNFAIP6P98066 277 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-216ENST00000583804 CLVS2Q5SYC1 327 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 Q6ZSR3 168 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 ZDHHC23Q8IYP9 409 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 DTX3Q8N9I9 347 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 ZBTB8BQ8NAP8 495 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-216ENST00000583804 SLC25A46Q96AG3 418 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 CEP19Q96LK0 163 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 LURAP1Q96LR2 239 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 GAL3ST1Q99999 423 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 ADAT1Q9BUB4 502 aaKnown RBP9.31□□□□□ -0.92
TOP3A-216ENST00000583804 DECR2Q9NUI1 292 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 ZDHHC8Q9ULC8 765 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 NOP16Q9Y3C1 178 aaKnown RBP9.31□□□□□ -0.92
TOP3A-216ENST00000583804 MPC1Q9Y5U8 109 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 CELSR2Q9HCU4 2923 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 AKAP6Q13023 2319 aa9.31□□□□□ -0.92
TOP3A-216ENST00000583804 DSCAMO60469 2012 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 TRAV1-2A0A0B4J238 106 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 F5H5P2 479 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 CTDSP2O14595 271 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 PDCD5O14737 125 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 SULT1B1O43704 296 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 GMDSO60547 372 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 PAHP00439 452 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 ATF1P18846 271 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 FSTP19883 344 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 AZGP1P25311 298 aaKnown RBP9.3□□□□□ -0.92
TOP3A-216ENST00000583804 BDKRB2P30411 391 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 TNFSF8P32971 234 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 CCL8P80075 99 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 PCGF3Q3KNV8 242 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 SFXN4Q6P4A7 337 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 METAP1DQ6UB28 335 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-216ENST00000583804 SPERTQ8NA61 448 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 POC5Q8NA72 575 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 OR5D14Q8NGL3 314 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 PP6455Q8WZ26 134 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 C10orf35Q96D05 121 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 RNF170Q96K19 258 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 FAM210AQ96ND0 272 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 DIRC2Q96SL1 478 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 GPER1Q99527 375 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 SDHCQ99643 169 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-216ENST00000583804 MICU1Q9BPX6 476 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 CHST5Q9GZS9 411 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 EGLN1Q9GZT9 426 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 FGF23Q9GZV9 251 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-216ENST00000583804 NKIRAS2Q9NYR9 191 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 SLC7A11Q9UPY5 501 aa9.3□□□□□ -0.92
TOP3A-216ENST00000583804 RAI1Q7Z5J4 1906 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-216ENST00000583804 C3orf80F5H4A9 247 aa9.29□□□□□ -0.92
TOP3A-216ENST00000583804 H7C417 338 aa9.29□□□□□ -0.92
TOP3A-216ENST00000583804 OVOL3O00110 214 aa9.29□□□□□ -0.92
TOP3A-216ENST00000583804 APOA1P02647 267 aa9.29□□□□□ -0.92
TOP3A-216ENST00000583804 GRPP07492 148 aa9.29□□□□□ -0.92
TOP3A-216ENST00000583804 OR3A4PP47883 348 aa9.29□□□□□ -0.92
TOP3A-216ENST00000583804 POU3F4P49335 361 aa9.29□□□□□ -0.92
TOP3A-216ENST00000583804 MZT1Q08AG7 82 aa9.29□□□□□ -0.92
TOP3A-216ENST00000583804 FAM209AQ5JX71 171 aa9.29□□□□□ -0.92
TOP3A-216ENST00000583804 UBASH3BQ8TF42 649 aa9.29□□□□□ -0.92
TOP3A-216ENST00000583804 NEU4Q8WWR8 484 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms