RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 SFRP4Q6FHJ7 346 aaPredicted RBP9.68□□□□□ -0.86
ERBB2-208ENST00000578630 HAGHLQ6PII5 290 aaPredicted RBP9.68□□□□□ -0.86
ERBB2-208ENST00000578630 WDR82Q6UXN9 313 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 PRSS48Q7RTY5 328 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 WDR86Q86TI4 376 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 ZNF485Q8NCK3 441 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 DNAAF1Q8NEP3 725 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 DEFB108BQ8NET1 73 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 OR10AC1Q8NH08 325 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 ADAT3Q96EY9 351 aaPredicted RBP9.68□□□□□ -0.86
ERBB2-208ENST00000578630 C1orf159Q96HA4 380 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 ZCCHC4Q9H5U6 513 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 PATZ1Q9HBE1 687 aaKnown RBP9.68□□□□□ -0.86
ERBB2-208ENST00000578630 YAE1D1Q9NRH1 226 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 POLDIP2Q9Y2S7 368 aa9.68□□□□□ -0.86
ERBB2-208ENST00000578630 FLNAP21333 2647 aaKnown RBP9.68□□□□□ -0.86
ERBB2-208ENST00000578630 PQLC2LA1A4F0 135 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 C3orf80F5H4A9 247 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 PLPP2O43688 288 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 LMX1BO60663 402 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 FOXH1O75593 365 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 ALX3O95076 343 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 CYB5AP00167 134 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 LALBAP00709 142 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 IGHV2-5P01817 119 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 WNT2P09544 360 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 MUC1P15941 1255 aaPredicted RBP9.67□□□□□ -0.86
ERBB2-208ENST00000578630 PCMT1P22061 227 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 RBP2P50120 134 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 IRF3Q14653 427 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 ZNF404Q494X3 552 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 FAM201AQ5SY85 155 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 XAF1Q6GPH4 301 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 FAM166AQ6J272 317 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 DCDC5Q6ZRR9 648 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 NLRC3Q7RTR2 1065 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 MS4A15Q8N5U1 240 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 PARP16Q8N5Y8 322 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 GCSAMQ8N6F7 178 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 OR51A4Q8NGJ6 313 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 TRMT10AQ8TBZ6 339 aaKnown RBP9.67□□□□□ -0.86
ERBB2-208ENST00000578630 RPS4Y2Q8TD47 263 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 AQP3Q92482 292 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 SPSB1Q96BD6 273 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 MSI2Q96DH6 328 aaKnown RBP9.67□□□□□ -0.86
ERBB2-208ENST00000578630 TMEM246Q9BRR3 403 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 METTL17Q9H7H0 456 aaPredicted RBP9.67□□□□□ -0.86
ERBB2-208ENST00000578630 PAK1IP1Q9NWT1 392 aaPredicted RBP9.67□□□□□ -0.86
ERBB2-208ENST00000578630 RASL12Q9NYN1 266 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 KCNS2Q9ULS6 477 aa9.67□□□□□ -0.86
ERBB2-208ENST00000578630 SIRT4Q9Y6E7 314 aaPredicted RBP9.67□□□□□ -0.86
ERBB2-208ENST00000578630 CEACAM18A8MTB9 384 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 A8MV72 311 aaPredicted RBP9.66□□□□□ -0.86
ERBB2-208ENST00000578630 SRRM5B3KS81 715 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 J3QT63 122 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 AKR7A2O43488 359 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 MT-ND2P03891 347 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 RPS2P15880 293 aaKnown RBP9.66□□□□□ -0.86
ERBB2-208ENST00000578630 GLRA1P23415 457 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 IL2RGP31785 369 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 RBMXP38159 391 aaKnown RBP9.66□□□□□ -0.86
ERBB2-208ENST00000578630 SOX2P48431 317 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 MTCP1P56278 107 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 GABARAPL2P60520 117 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 GPR50Q13585 617 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 ESCO2Q56NI9 601 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 TEX36Q5VZQ5 186 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 LHFPL2Q6ZUX7 228 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 ANGPTL5Q86XS5 388 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 MKXQ8IYA7 352 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 ZFP41Q8N8Y5 198 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 OR8B3Q8NGG8 313 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 OR51F2Q8NH61 342 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 NPRL2Q8WTW4 380 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 THRSPQ92748 146 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 TMIGD2Q96BF3 282 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 C12orf43Q96C57 262 aaKnown RBP9.66□□□□□ -0.86
ERBB2-208ENST00000578630 NEIL1Q96FI4 390 aaPredicted RBP9.66□□□□□ -0.86
ERBB2-208ENST00000578630 CPNE2Q96FN4 548 aaPredicted RBP9.66□□□□□ -0.86
ERBB2-208ENST00000578630 OPALINQ96PE5 141 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 OR8B2Q96RD0 313 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 PKIBQ9C010 78 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 FGF23Q9GZV9 251 aaPredicted RBP9.66□□□□□ -0.86
ERBB2-208ENST00000578630 ISYNA1Q9NPH2 558 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 DNAJB11Q9UBS4 358 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 LRRC42Q9Y546 428 aa9.66□□□□□ -0.86
ERBB2-208ENST00000578630 TRAV20A0A0B4J274 112 aa9.65□□□□□ -0.86
ERBB2-208ENST00000578630 PNMA8CA0A1B0GUJ8 204 aa9.65□□□□□ -0.86
ERBB2-208ENST00000578630 FAM157AC9JC47 383 aa9.65□□□□□ -0.86
ERBB2-208ENST00000578630 NOS1APO75052 506 aaPredicted RBP9.65□□□□□ -0.86
ERBB2-208ENST00000578630 RHBDL1O75783 438 aa9.65□□□□□ -0.86
ERBB2-208ENST00000578630 MSMBP08118 114 aa9.65□□□□□ -0.86
ERBB2-208ENST00000578630 HCKP08631 526 aa9.65□□□□□ -0.86
ERBB2-208ENST00000578630 ACAA1P09110 424 aaPredicted RBP9.65□□□□□ -0.86
ERBB2-208ENST00000578630 HSMCR30P0CW71 290 aa9.65□□□□□ -0.86
ERBB2-208ENST00000578630 RAB3AP20336 220 aa9.65□□□□□ -0.86
ERBB2-208ENST00000578630 AZGP1P25311 298 aaKnown RBP9.65□□□□□ -0.86
ERBB2-208ENST00000578630 CD80P33681 288 aa9.65□□□□□ -0.86
ERBB2-208ENST00000578630 NPY4RP50391 375 aa9.65□□□□□ -0.86
ERBB2-208ENST00000578630 DVL1P1P54792 670 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms