RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 TGFAP01135 160 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 GYPAP02724 150 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 CCDC159P0C7I6 412 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 ZNF20P17024 532 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 TMEM155Q4W5P6 130 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 ASPHD2Q6ICH7 369 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 ANGPTL5Q86XS5 388 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 CALHM1Q8IU99 346 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 C1orf87Q8N0U7 546 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 FGFRL1Q8N441 504 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 NANOGP1Q8N7R0 232 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 OR5A2Q8NGI9 324 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 TSEN15Q8WW01 171 aaKnown RBP18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 C1orf159Q96HA4 380 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 COMMD4Q9H0A8 199 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 PATZ1Q9HBE1 687 aaKnown RBP18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 SNTG1Q9NSN8 517 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 SCN3BQ9NY72 215 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 CTSZQ9UBR2 303 aa18.15■□□□□ 0.5
CDC42EP4-203ENST00000578516 OR5B21A6NL26 309 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 F5H0A9 414 aaPredicted RBP18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 LGALS8O00214 317 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 OGG1O15527 345 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 LHBP01229 141 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 ZFP36P26651 326 aaKnown RBP18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 MAP2K4P45985 399 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 WNT4P56705 351 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 LCN2P80188 198 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 IRF3Q14653 427 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 FAM76BQ5HYJ3 339 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 RPL22L1Q6P5R6 122 aaKnown RBP18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 FAM90A1Q86YD7 464 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 LINC01356Q8N9X3 169 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 OR13C9Q8NGT0 318 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 AQP3Q92482 292 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 RFT1Q96AA3 541 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 RAB39BQ96DA2 213 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 SPACA5Q96QH8 159 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 NKX3-1Q99801 234 aaPredicted RBP18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 DUSP21Q9H596 190 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 TRIM36Q9NQ86 728 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 PCDHB10Q9UN67 800 aa18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 LSM2Q9Y333 95 aaKnown RBP18.14■□□□□ 0.49
CDC42EP4-203ENST00000578516 HIVEP2P31629 2446 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 OOEPA6NGQ2 149 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 SRRM5B3KS81 715 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 PHF1O43189 567 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 PLPP2O43688 288 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 FCN3O75636 299 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 INMTO95050 263 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 RPS2P15880 293 aaKnown RBP18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 HAAOP46952 286 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 MRPL28Q13084 256 aaKnown RBP18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 MED21Q13503 144 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 DMKNQ6E0U4 476 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 SPICQ8N5J4 248 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 OR5T2Q8NGG2 359 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 SMIM19Q96E16 107 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 PGLYRP3Q96LB9 341 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 MYCBPQ99417 103 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 TPRKBQ9Y3C4 175 aa18.13■□□□□ 0.49
CDC42EP4-203ENST00000578516 SELLP14151 372 aa18.12■□□□□ 0.49
CDC42EP4-203ENST00000578516 ATF1P18846 271 aa18.12■□□□□ 0.49
CDC42EP4-203ENST00000578516 MYDGFQ969H8 173 aa18.12■□□□□ 0.49
CDC42EP4-203ENST00000578516 CCDC90BQ9GZT6 254 aa18.12■□□□□ 0.49
CDC42EP4-203ENST00000578516 TAS2R4Q9NYW5 299 aa18.12■□□□□ 0.49
CDC42EP4-203ENST00000578516 DHDHQ9UQ10 334 aa18.12■□□□□ 0.49
CDC42EP4-203ENST00000578516 NSD1Q96L73 2696 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP4-203ENST00000578516 A8MV72 311 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 KIAA1324LA8MWY0 1029 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 J3QT63 122 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 RGS10O43665 173 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 MSMBP08118 114 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 WNT2P09544 360 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 AMY2BP19961 511 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 AZGP1P25311 298 aaKnown RBP18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 CCDC58Q4VC31 144 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 FAM166AQ6J272 317 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 MUC20Q8N307 709 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 CCDC54Q8NEL0 328 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 OR51A2Q8NGJ7 313 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 GHSRQ92847 366 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 CDCA4Q9BXL8 241 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 RASSF4Q9H2L5 321 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 SMURF1Q9HCE7 757 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 ERGIC3Q9Y282 383 aa18.11■□□□□ 0.49
CDC42EP4-203ENST00000578516 B4DSR2 109 aa18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 GATBO75879 557 aaKnown RBP18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 ZNF12P17014 697 aa18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 RPS11P62280 158 aaKnown RBP eCLIP18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 INSL4Q14641 139 aa18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 TEX36Q5VZQ5 186 aa18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 CRIP3Q6Q6R5 217 aa18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 EGFL6Q8IUX8 553 aa18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 PP6455Q8WZ26 134 aa18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 ITFG2Q969R8 447 aa18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 MND1Q9BWT6 205 aa18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 SLC7A11Q9UPY5 501 aa18.1■□□□□ 0.49
CDC42EP4-203ENST00000578516 F8VVB4 439 aa18.09■□□□□ 0.49
CDC42EP4-203ENST00000578516 F8VWA3 439 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms