RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 LILRA1O75019 489 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 TNFSF4P23510 183 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 CD200P41217 278 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 POU3F4P49335 361 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 ART1P52961 327 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 PRSS12P56730 875 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 QRFPP83859 136 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 IL24Q13007 206 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 MSMPQ1L6U9 139 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 ALKBH6Q3KRA9 238 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 AWAT2Q6E213 333 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 CRIP3Q6Q6R5 217 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 VHLLQ6RSH7 139 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 CCDC190Q86UF4 302 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 SAMD12Q8N8I0 201 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 Q8NFD4 153 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 OR51D1Q8NGF3 324 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 LGALS14Q8TCE9 139 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 C15orf40Q8WUR7 153 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 TNFAIP8L1Q8WVP5 186 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 ERGIC1Q969X5 290 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 PIK3IP1Q96FE7 263 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 NUDT16L1Q9BRJ7 211 aaKnown RBP13.02□□□□□ -0.33
SS18-206ENST00000577572 METTL9Q9H1A3 318 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 TLNRD1Q9H1K6 362 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 OR51I2Q9H344 312 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 CISD1Q9NZ45 108 aaKnown RBP13.02□□□□□ -0.33
SS18-206ENST00000577572 TAAR3PQ9P1P4 343 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 POLDIP2Q9Y2S7 368 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 DOPEY1Q5JWR5 2465 aa13.02□□□□□ -0.33
SS18-206ENST00000577572 IGKV1-27A0A075B6S5 117 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 METTL21EPA6NDL7 271 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 TMEM14DPA8MWL7 114 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 CLDN25C9JDP6 229 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 H3BUI4 141 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 J3QT63 122 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 SIAH2O43255 324 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 PAHP00439 452 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 CD55P08174 381 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 TMEM225BP0DP42 221 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 SNRPBP14678 240 aaKnown RBP13.01□□□□□ -0.33
SS18-206ENST00000577572 TNFSF8P32971 234 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 NR4A2P43354 598 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 GPM6AP51674 278 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 NKPD1Q17RQ9 610 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 TMEM255AQ5JRV8 349 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 RAB12Q6IQ22 244 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 GLIPR1L1Q6UWM5 242 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 Q8IYB0 196 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 NPRL2Q8WTW4 380 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 S100A16Q96FQ6 103 aaKnown RBP13.01□□□□□ -0.33
SS18-206ENST00000577572 C1orf147Q96MC9 270 aaPredicted RBP13.01□□□□□ -0.33
SS18-206ENST00000577572 WDR12Q9GZL7 423 aaKnown RBP13.01□□□□□ -0.33
SS18-206ENST00000577572 MIXL1Q9H2W2 232 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 MS4A5Q9H3V2 200 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 AKIP1Q9NQ31 210 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 FAIMQ9NVQ4 179 aa13.01□□□□□ -0.33
SS18-206ENST00000577572 PRR14LQ5THK1 2151 aa13□□□□□ -0.33
SS18-206ENST00000577572 MLNRO43193 412 aa13□□□□□ -0.33
SS18-206ENST00000577572 AKR7A2O43488 359 aa13□□□□□ -0.33
SS18-206ENST00000577572 HPGDSO60760 199 aa13□□□□□ -0.33
SS18-206ENST00000577572 CHRM2P08172 466 aa13□□□□□ -0.33
SS18-206ENST00000577572 INHBBP09529 407 aa13□□□□□ -0.33
SS18-206ENST00000577572 PLA2G2AP14555 144 aa13□□□□□ -0.33
SS18-206ENST00000577572 MNDAP41218 407 aa13□□□□□ -0.33
SS18-206ENST00000577572 GATA4P43694 442 aa13□□□□□ -0.33
SS18-206ENST00000577572 OR3A4PP47883 348 aa13□□□□□ -0.33
SS18-206ENST00000577572 SRP9P49458 86 aaKnown RBP13□□□□□ -0.33
SS18-206ENST00000577572 ZNF81P51508 661 aa13□□□□□ -0.33
SS18-206ENST00000577572 CLDN12P56749 244 aa13□□□□□ -0.33
SS18-206ENST00000577572 SNTB1Q13884 538 aaKnown RBP13□□□□□ -0.33
SS18-206ENST00000577572 ZNF846Q147U1 533 aa13□□□□□ -0.33
SS18-206ENST00000577572 P2RY14Q15391 338 aa13□□□□□ -0.33
SS18-206ENST00000577572 PCGF3Q3KNV8 242 aa13□□□□□ -0.33
SS18-206ENST00000577572 ELP2Q6IA86 826 aa13□□□□□ -0.33
SS18-206ENST00000577572 MEX3BQ6ZN04 569 aaKnown RBP13□□□□□ -0.33
SS18-206ENST00000577572 Q6ZR03 302 aa13□□□□□ -0.33
SS18-206ENST00000577572 LRP11Q86VZ4 500 aa13□□□□□ -0.33
SS18-206ENST00000577572 DIRAS2Q96HU8 199 aa13□□□□□ -0.33
SS18-206ENST00000577572 SYT3Q9BQG1 590 aa13□□□□□ -0.33
SS18-206ENST00000577572 URM1Q9BTM9 101 aaKnown RBP13□□□□□ -0.33
SS18-206ENST00000577572 RHBDL2Q9NX52 303 aa13□□□□□ -0.33
SS18-206ENST00000577572 IL19Q9UHD0 177 aa13□□□□□ -0.33
SS18-206ENST00000577572 FZR1Q9UM11 496 aa13□□□□□ -0.33
SS18-206ENST00000577572 HEATR1Q9H583 2144 aaKnown RBP13□□□□□ -0.33
SS18-206ENST00000577572 CHD6Q8TD26 2715 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 TMEM272A0A1B0GTI8 110 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 FAM221AA4D161 298 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 A6NNC1 897 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 C19orf84I3L1E1 186 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 M0R233 179 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 TPD52L2O43399 206 aaKnown RBP12.99□□□□□ -0.33
SS18-206ENST00000577572 NOS1APO75052 506 aaPredicted RBP12.99□□□□□ -0.33
SS18-206ENST00000577572 KDM4BO94953 1096 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 VSIG8P0DPA2 414 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 BMP4P12644 408 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 CD40LGP29965 261 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 CFHR2P36980 270 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 HAAOP46952 286 aa12.99□□□□□ -0.33
SS18-206ENST00000577572 SRSF1Q07955 248 aaKnown RBP eCLIP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms