RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TSSK6Q9BXA6 273 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 SIRPDQ9H106 197 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 SEMA6AQ9H2E6 1030 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 PRDM13Q9H4Q3 707 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 NCOR1P1Q9H4R4 102 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 MED20Q9H944 212 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 FN3KRPQ9HA64 309 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 IL1RAPQ9NPH3 570 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 ARMC1Q9NVT9 282 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 TAS2R1Q9NYW7 299 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 C1RLQ9NZP8 487 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 PDP1Q9P0J1 537 aaPredicted RBP5.13□□□□□ -1.59
NUP88-212ENST00000576708 ZNF319Q9P2F9 582 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 ERVK-18Q9QC07 812 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 DNAJB11Q9UBS4 358 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 LYVE1Q9Y5Y7 322 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 COMMD3-BMI1R4GMX3 469 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 PKD1L1Q8TDX9 2849 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 IGHV1-69DA0A0B4J2H0 117 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 A0A0U1RQK1 487 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 hCG_1807616A0A1W2PRN6 198 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 DHRS12A0PJE2 317 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 OOEPA6NGQ2 149 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 FAM183AA6NL82 134 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 P2RY10O00398 339 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 ZNF593O00488 134 aaPredicted RBP5.12□□□□□ -1.59
NUP88-212ENST00000576708 DVL1O14640 695 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 GMDSO60547 372 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 CCNB2O95067 398 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 SPDEFO95238 335 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 FSTL3O95633 263 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 PTBP3O95758 552 aaKnown RBP5.12□□□□□ -1.59
NUP88-212ENST00000576708 IGHV1-69P01742 117 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 IGHV4-59P01825 116 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 SELLP14151 372 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 SPI1P17947 270 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 CPT2P23786 658 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 OTX1P32242 354 aaPredicted RBP5.12□□□□□ -1.59
NUP88-212ENST00000576708 IFNGR2P38484 337 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 CX3CR1P49238 355 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 ENTPD1P49961 510 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 HMGA2P52926 109 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 RAG2P55895 527 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 CSNK2BP67870 215 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 FAM3AP98173 230 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 RELQ04864 619 aaPredicted RBP5.12□□□□□ -1.59
NUP88-212ENST00000576708 EIF2B1Q14232 305 aaKnown RBP5.12□□□□□ -1.59
NUP88-212ENST00000576708 TAF13Q15543 124 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 PCK2Q16822 640 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 CD300EQ496F6 205 aaPredicted RBP5.12□□□□□ -1.59
NUP88-212ENST00000576708 KLHL12Q53G59 568 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 SAMD4BQ5PRF9 694 aaKnown RBP5.12□□□□□ -1.59
NUP88-212ENST00000576708 LINC01590Q5TEZ4 76 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 CRIP3Q6Q6R5 217 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 DRAM2Q6UX65 266 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 RASSF6Q6ZTQ3 369 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 SLC16A9Q7RTY1 509 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 CPLX4Q7Z7G2 160 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 PGAM4Q8N0Y7 254 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 Q8N1X5 172 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 LINC00471Q8N535 108 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 IQCF1Q8N6M8 205 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 FAM216BQ8N7L0 139 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 AQP11Q8NBQ7 271 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 OR5T2Q8NGG2 359 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 OR52L1Q8NGH7 329 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 OR6K6Q8NGW6 343 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 OR2T4Q8NH00 348 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 LRRC29Q8WV35 223 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 ST8SIA4Q92187 359 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 TRIM63Q969Q1 353 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 ERGIC1Q969X5 290 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 SGK3Q96BR1 496 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 WDFY2Q96P53 400 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 NMNAT2Q9BZQ4 307 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 SLITRK2Q9H156 845 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 TBC1D23Q9NUY8 699 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 DNAJC27Q9NZQ0 273 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 KCNG2Q9UJ96 466 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 U3KQV3 271 aa5.12□□□□□ -1.59
NUP88-212ENST00000576708 MGAM2Q2M2H8 2515 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 TRAV38-1A0A0B4J264 116 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 ANKRD30BLA7E2S9 258 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.11□□□□□ -1.59
NUP88-212ENST00000576708 ACOT8O14734 319 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 GPR137BO60478 399 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 LHBP01229 141 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 CRYBA1P05813 215 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 ANXA2P07355 339 aaKnown RBP5.11□□□□□ -1.59
NUP88-212ENST00000576708 FMO3P31513 532 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 NPY4RP50391 375 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 MXRA7P84157 204 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 KLRD1Q13241 179 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 TIGD6Q17RP2 521 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 MIDNQ504T8 468 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 PDLIM3Q53GG5 364 aaPredicted RBP5.11□□□□□ -1.59
NUP88-212ENST00000576708 WDR38Q5JTN6 314 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 KRBOX4Q5JUW0 171 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 METTL11BQ5VVY1 283 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 OLFML2AQ68BL7 652 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms