RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ADRA2CP18825 462 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 CCR9P51686 369 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 ELF3P78545 371 aaPredicted RBP19.55■□□□□ 0.72
SNF8-217ENST00000576353 ADARB1P78563 741 aaKnown RBP19.55■□□□□ 0.72
SNF8-217ENST00000576353 C11orf91Q3C1V1 193 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 SLC36A1Q7Z2H8 476 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 AQP3Q92482 292 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 PELI1Q96FA3 418 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 OCEL1Q9H607 264 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 FRRS1LQ9P0K9 344 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 PQLC2LA1A4F0 135 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 IRGMA1A4Y4 181 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 SERPINA3P01011 423 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 ISG15P05161 165 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 EPHA1P21709 976 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 GMFBP60983 142 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 MRPL28Q13084 256 aaKnown RBP19.54■□□□□ 0.72
SNF8-217ENST00000576353 SMN1Q16637 294 aaKnown RBP19.54■□□□□ 0.72
SNF8-217ENST00000576353 ATPAF1Q5TC12 328 aaPredicted RBP19.54■□□□□ 0.72
SNF8-217ENST00000576353 HAGHLQ6PII5 290 aaPredicted RBP19.54■□□□□ 0.72
SNF8-217ENST00000576353 RDH10Q8IZV5 341 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 TMEM158Q8WZ71 300 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 DACT3Q96B18 629 aaPredicted RBP19.54■□□□□ 0.72
SNF8-217ENST00000576353 CCL13Q99616 98 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 NUDT16L1Q9BRJ7 211 aaKnown RBP19.54■□□□□ 0.72
SNF8-217ENST00000576353 DNTTIP1Q9H147 329 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 WDR13Q9H1Z4 485 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 SLC7A11Q9UPY5 501 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 HSPE1-MOB4S4R3N1 261 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 WNK2Q9Y3S1 2297 aa19.54■□□□□ 0.72
SNF8-217ENST00000576353 H0YAE9 185 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 H3BSH0 61 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 DVL1O14640 695 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 TCF21O43680 179 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 ENSAO43768 121 aaKnown RBP19.53■□□□□ 0.72
SNF8-217ENST00000576353 RHBDL1O75783 438 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 GATBO75879 557 aaKnown RBP19.53■□□□□ 0.72
SNF8-217ENST00000576353 PPIAL4GP0DN37 164 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 GLRA1P23415 457 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 HAAOP46952 286 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 NANOS3P60323 173 aaKnown RBP19.53■□□□□ 0.72
SNF8-217ENST00000576353 CNIH3Q8TBE1 160 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 HAVCR2Q8TDQ0 301 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 TMIGD2Q96BF3 282 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 SEH1LQ96EE3 360 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 MDFIQ99750 246 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 FGF20Q9NP95 211 aaPredicted RBP19.53■□□□□ 0.72
SNF8-217ENST00000576353 RASL12Q9NYN1 266 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 POLDIP2Q9Y2S7 368 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 ARHGAP32A7KAX9 2087 aa19.53■□□□□ 0.72
SNF8-217ENST00000576353 ECDO95905 644 aaPredicted RBP19.52■□□□□ 0.72
SNF8-217ENST00000576353 FSHBP01225 129 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 LIPFP07098 398 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 RPSAP08865 295 aaKnown RBP19.52■□□□□ 0.72
SNF8-217ENST00000576353 DCKP27707 260 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 CAPGP40121 348 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 SLC34A1Q06495 639 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 ALKBH1Q13686 389 aaKnown RBP19.52■□□□□ 0.72
SNF8-217ENST00000576353 ARMCX4Q5H9R4 360 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 STUMQ69YW2 141 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 OR5T2Q8NGG2 359 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 PP6455Q8WZ26 134 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 ZNF649Q9BS31 505 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 JAM3Q9BX67 310 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 CHST5Q9GZS9 411 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 RASSF4Q9H2L5 321 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 ISG20L2Q9H9L3 353 aaKnown RBP19.52■□□□□ 0.72
SNF8-217ENST00000576353 SMURF1Q9HCE7 757 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 MXRA5Q9NR99 2828 aa19.52■□□□□ 0.72
SNF8-217ENST00000576353 A0A0A6YYJ9 748 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 ERICH4A6NGS2 130 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 NKX6-3A6NJ46 265 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 C22orf46C9J442 243 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 J3QT63 122 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 FPR2P25090 351 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 GBX2P52951 348 aaPredicted RBP19.51■□□□□ 0.71
SNF8-217ENST00000576353 ZNF676Q8N7Q3 588 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 ZNF418Q8TF45 676 aaPredicted RBP19.51■□□□□ 0.71
SNF8-217ENST00000576353 MED30Q96HR3 178 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 SNTG1Q9NSN8 517 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 NLKQ9UBE8 527 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 HHLA2Q9UM44 414 aa19.51■□□□□ 0.71
SNF8-217ENST00000576353 OR4C45A6NMZ5 311 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 OR2AT4A6NND4 320 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 RNF212BA8MTL3 300 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 GPR37O15354 613 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 NDUFB3O43676 98 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 TGM4P49221 684 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 FUT6P51993 359 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 UBE2V2Q15819 145 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 C8orf59Q8N0T1 100 aaPredicted RBP19.5■□□□□ 0.71
SNF8-217ENST00000576353 PNLDC1Q8NA58 520 aaKnown RBP19.5■□□□□ 0.71
SNF8-217ENST00000576353 POC1AQ8NBT0 407 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 ST8SIA4Q92187 359 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 NUP50Q9UKX7 468 aa19.5■□□□□ 0.71
SNF8-217ENST00000576353 FAM230AA0A1W2PPH8 454 aa19.49■□□□□ 0.71
SNF8-217ENST00000576353 NOS1APO75052 506 aaPredicted RBP19.49■□□□□ 0.71
SNF8-217ENST00000576353 LIMS3P0CW19 117 aa19.49■□□□□ 0.71
SNF8-217ENST00000576353 LIMS4P0CW20 117 aa19.49■□□□□ 0.71
SNF8-217ENST00000576353 ZNF20P17024 532 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms