RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 LYZL2Q7Z4W2 148 aa12.83□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF440Q8IYI8 595 aa12.83□□□□□ -0.36
SCARF1-209ENST00000576012 GPR84Q9NQS5 396 aa12.83□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF581Q9P0T4 197 aa12.83□□□□□ -0.36
SCARF1-209ENST00000576012 FSTP19883 344 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 SSPNQ14714 243 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 HLA-DQA1Q5Y7H0 255 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 OGFOD3Q6PK18 319 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 FAM57BQ71RH2 274 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 TMEM217Q8N7C4 229 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 DTWD2Q8NBA8 298 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 C11orf40Q8WZ69 217 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 SLC35B3Q9H1N7 401 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF319Q9P2F9 582 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 SHANK1Q9Y566 2161 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 A0A087X0M5 115 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 A0A1B0GX30 115 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 FPR2P25090 351 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 SLC37A1P57057 533 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 PCK2Q16822 640 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 LRP11Q86VZ4 500 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 SSX3Q99909 188 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 MESP1Q9BRJ9 268 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 ATG101Q9BSB4 218 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 HS3ST3B1Q9Y662 390 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 IGHV3-20A0A0C4DH32 117 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 BPNT1O95861 308 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 SNRPCP09234 159 aaKnown RBP12.82□□□□□ -0.36
SCARF1-209ENST00000576012 G0S2P27469 103 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 QRFPP83859 136 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 HHEXQ03014 270 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF519Q8TB69 540 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 Q8WTZ3 238 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 PIGTQ969N2 578 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 OR5B2Q96R09 309 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 MAGT1Q9H0U3 335 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 IL23AQ9NPF7 189 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 LIPGQ9Y5X9 500 aa12.82□□□□□ -0.36
SCARF1-209ENST00000576012 MASP2O00187 686 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 RER1O15258 196 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 HOXA5P20719 270 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 COL9A1P20849 921 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 BIDP55957 195 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 SLC35A1P78382 337 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 MFAP5Q13361 173 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 SGCBQ16585 318 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 OR2T2Q6IF00 324 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 Q6ZSR6 202 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 SGPP2Q8IWX5 399 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 RAB39BQ96DA2 213 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 STARD10Q9Y365 291 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 CLDN16Q9Y5I7 305 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 DHRS7CA6NNS2 312 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 A8MVM7 634 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 PLPP3O14495 311 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 ONECUT2O95948 504 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 MBPP02686 304 aaPredicted RBP12.81□□□□□ -0.36
SCARF1-209ENST00000576012 TMEM225BP0DP42 221 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 CHATP28329 748 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 CRABP1P29762 137 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 STARD6P59095 220 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 ERVFRD-1P60508 538 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 NKX6-1P78426 367 aaPredicted RBP12.81□□□□□ -0.36
SCARF1-209ENST00000576012 FOXK1P85037 733 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 PLCXD2Q0VAA5 305 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 KHDC3LQ587J8 217 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 Q7L0L9 218 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 VN1R1Q9GZP7 353 aa12.81□□□□□ -0.36
SCARF1-209ENST00000576012 BTBD17A6NE02 478 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF850A8MQ14 1090 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 H3BQ15 152 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 PPP1R2P9O14990 202 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 CDX1P47902 265 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-209ENST00000576012 SSX2Q16385 188 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 TMEM196Q5HYL7 178 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 C7orf61Q8IZ16 206 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 OR52M1Q8NGK5 317 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 NTNG2Q96CW9 530 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 THOC3Q96J01 351 aaKnown RBP12.8□□□□□ -0.36
SCARF1-209ENST00000576012 S100A13Q99584 98 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 CHST5Q9GZS9 411 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 C1orf123Q9NWV4 160 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 PRODH2Q9UF12 536 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF705GA8MUZ8 300 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-209ENST00000576012 TMEM11P17152 192 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 TLE3Q04726 772 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF574Q6ZN55 896 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF610Q8N9Z0 462 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 PRDM13Q9H4Q3 707 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 DNAJB11Q9UBS4 358 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 DOCK8Q8NF50 2099 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 TMEM14DPA8MWL7 114 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 TAAR5O14804 337 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HIST1H2BKO60814 126 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 DEDDO75618 318 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HIST1H2BJP06899 126 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 OR5AC1P0C628 307 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HOXB2P14652 356 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms