RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 TMEM185AQ8NFB2 350 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 OR2T12Q8NG77 320 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 OR4D11Q8NGI4 311 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 SPTSSAQ969W0 71 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 BPIFA2Q96DR5 249 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 CEP19Q96LK0 163 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 GAFA1Q96PS6 74 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 PITX2Q99697 317 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 KCTD14Q9BQ13 255 aaPredicted RBP4.72□□□□□ -1.65
SMG6-219ENST00000575663 SYT4Q9H2B2 425 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 MAGIXQ9H6Y5 334 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 CMTM6Q9NX76 183 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 HAO2Q9NYQ3 351 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 SLC25A37Q9NYZ2 338 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 VAPAQ9P0L0 249 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 COA3Q9Y2R0 106 aaPredicted RBP4.72□□□□□ -1.65
SMG6-219ENST00000575663 LRP12Q9Y561 859 aa4.72□□□□□ -1.65
SMG6-219ENST00000575663 TRAV6A0A075B6T7 132 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 EFCAB9A8MZ26 197 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 ANKRD65E5RJM6 399 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 M0R135 149 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 LY86O95711 162 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 ARG1P05089 322 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 LPLP06858 475 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 CD14P08571 375 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 CRABP1P29762 137 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 SOX6P35712 828 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 CBX5P45973 191 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 RAB13P51153 203 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 DYNLT3P51808 116 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 CAPZA1P52907 286 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 RAB25P57735 213 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 OR12D2P58182 307 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 GMFBP60983 142 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 CSNK2BP67870 215 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 HIST1H3AP68431 136 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 ZNF92Q03936 586 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 ST3GAL3Q11203 375 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 KRR1Q13601 381 aaKnown RBP4.71□□□□□ -1.66
SMG6-219ENST00000575663 KPNB1Q14974 876 aaKnown RBP4.71□□□□□ -1.66
SMG6-219ENST00000575663 SSX2Q16385 188 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 KCNMB1Q16558 191 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 DGUOKQ16854 277 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 RFX4Q33E94 735 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 KRTAP27-1Q3LI81 207 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 SLC36A3Q495N2 470 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 HIST2H3PS2Q5TEC6 136 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 ZNF788Q6ZQV5 615 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 Q6ZS46 218 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 HIST2H3AQ71DI3 136 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 LHFPL4Q7Z7J7 247 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 ZNF554Q86TJ5 538 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 ADCK1Q86TW2 530 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 STX12Q86Y82 276 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 SBSPONQ8IVN8 264 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 MSRB3Q8IXL7 192 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 OSR2Q8N2R0 312 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 LRRC75AQ8NAA5 344 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 OR1M1Q8NGA1 313 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 OR5T2Q8NGG2 359 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 OR56B2PQ8NGI1 322 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 OR4C15Q8NGM1 316 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 OR5M8Q8NGP6 311 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 OR13D1Q8NGV5 346 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 OR2AJ1Q8NGZ0 328 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 OR51A7Q8NH64 312 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 DDB2Q92466 427 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 MALSU1Q96EH3 234 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 ZNF799Q96GE5 643 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 NSMCE2Q96MF7 247 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 MNTQ99583 582 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 SCPEP1Q9HB40 452 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 S100A14Q9HCY8 104 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 USE1Q9NZ43 259 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 RIMS3Q9UJD0 308 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 BAG5Q9UL15 447 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 SAMD4AQ9UPU9 718 aaKnown RBP4.71□□□□□ -1.66
SMG6-219ENST00000575663 ZNF256Q9Y2P7 627 aaPredicted RBP4.71□□□□□ -1.66
SMG6-219ENST00000575663 ADAM18Q9Y3Q7 739 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 AP4S1Q9Y587 144 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 LHFPL6Q9Y693 200 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 RYR1P21817 5038 aa4.71□□□□□ -1.66
SMG6-219ENST00000575663 PLECQ15149 4684 aaKnown RBP4.71□□□□□ -1.66
SMG6-219ENST00000575663 FRAS1Q86XX4 4008 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 DHRS12A0PJE2 317 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 PSMB11A5LHX3 300 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 FAM90A8PA6NJQ4 464 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 ANXA2P2A6NMY6 339 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.7□□□□□ -1.66
SMG6-219ENST00000575663 PSMD9O00233 223 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 CDIPTO14735 213 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 ARPC2O15144 300 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 GSTA4O15217 222 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 XRCC2O43543 280 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 S100A9P06702 114 aaKnown RBP4.7□□□□□ -1.66
SMG6-219ENST00000575663 ACAA1P09110 424 aaPredicted RBP4.7□□□□□ -1.66
SMG6-219ENST00000575663 PGA5P0DJD9 388 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 AMY2BP19961 511 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 NOS3P29474 1203 aa4.7□□□□□ -1.66
SMG6-219ENST00000575663 DDOSTP39656 456 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms