RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 CYTH3O43739 400 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 UGT2B11O75310 529 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 RP2O75695 350 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 RLN2P04090 185 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 PCCAP05165 728 aaPredicted RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 BCHEP06276 602 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 IGKV5-2P06315 115 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 IGHV4-34P06331 123 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 TAC1P20366 129 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 HOXA6P31267 233 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 SSTR5P35346 364 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 NUDT1P36639 197 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 ACTR1BP42025 376 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 CDKN2CP42773 168 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 CXCL5P42830 114 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 TTPAP49638 278 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 ERFP50548 548 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 CEBPGP53567 150 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 CLDN12P56749 244 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 CRADDP78560 199 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 BASP1P80723 227 aaKnown RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 BAXQ07812 192 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 LAMTOR4Q0VGL1 99 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 STX5Q13190 355 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 ERCC8Q13216 396 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 BCL2A1Q16548 175 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 MRGPRG-AS1Q2M3A8 158 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 CEACAM16Q2WEN9 425 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 C6orf99Q4VX62 202 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 PDZD11Q5EBL8 140 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 SAPCD1Q5SSQ6 148 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 OGFRL1Q5TC84 451 aaPredicted RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 KDM4DQ6B0I6 523 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 FAM45BPQ6NSW5 357 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 ZNF544Q6NX49 715 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 OPN5Q6U736 354 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 DRAM2Q6UX65 266 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 LYPD2Q6UXB3 125 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 IL34Q6ZMJ4 242 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 MDP1Q86V88 176 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 C2orf73Q8N5S3 287 aaPredicted RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 CCNYL1Q8N7R7 359 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 MAPK1IP1LQ8NDC0 245 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 OR5T1Q8NG75 326 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 OR5L1Q8NGL2 311 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 OR13G1Q8NGZ3 307 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 SYNPRQ8TBG9 265 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 DCAKDQ8WVC6 231 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 RNF133Q8WVZ7 376 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 TM4SF18Q96CE8 201 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 DDIT4LQ96D03 193 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 YIPF6Q96EC8 236 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 MRPL48Q96GC5 212 aaKnown RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 SMARCD1Q96GM5 515 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 SNF8Q96H20 258 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 SMIM8Q96KF7 97 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 PGLYRP3Q96LB9 341 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 QKIQ96PU8 341 aaKnown RBP eCLIP1.49□□□□□ -2.17
CHD3-217ENST00000574022 GPR22Q99680 433 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 HDHD3Q9BSH5 251 aaPredicted RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 TAPBPLQ9BX59 468 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 GFRA4Q9GZZ7 299 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 CDC42EP4Q9H3Q1 356 aaKnown RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 DHX35Q9H5Z1 703 aaKnown RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 RHOFQ9HBH0 211 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 SLC40A1Q9NP59 571 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 MMP26Q9NRE1 261 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 SPANXB1Q9NS25 103 aaPredicted RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 FGFR1OP2Q9NVK5 253 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 RBM22Q9NW64 420 aaKnown RBP eCLIP1.49□□□□□ -2.17
CHD3-217ENST00000574022 RBFOX1Q9NWB1 397 aaKnown RBP1.49□□□□□ -2.17
CHD3-217ENST00000574022 C3orf18Q9UK00 162 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 ZNF225Q9UK10 706 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 TP53TG5Q9Y2B4 290 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 ARHGAP23Q9P227 1491 aa1.49□□□□□ -2.17
CHD3-217ENST00000574022 CARMIL3Q8ND23 1372 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 RAB3GAP2Q9H2M9 1393 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 TMEM131Q92545 1883 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 MN1Q10571 1320 aaPredicted RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 IGLV11-55A0A075B6I3 123 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 IGKV1-27A0A075B6S5 117 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 RBFOX3A6NFN3 312 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 OR2AT4A6NND4 320 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 ZNF705GA8MUZ8 300 aaPredicted RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 EFCAB9A8MZ26 197 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 KRBOX1C9JBD0 128 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 LRRN3E7EW58 273 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 NDUFC2-KCTD14E9PQ53 114 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 F5H5K5 113 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 F5H768 121 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 INS-IGF2F8WCM5 200 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 H0Y980 276 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 M0R1X1 148 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 CCRL2O00421 344 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 PHOX2AO14813 284 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 PHYHO14832 338 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 BIRC5O15392 142 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 BCL2L11O43521 198 aa1.48□□□□□ -2.17
CHD3-217ENST00000574022 TRAF3IP2O43734 574 aaPredicted RBP1.48□□□□□ -2.17
CHD3-217ENST00000574022 CD5LO43866 347 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms