RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 LILRB4Q8NHJ6 448 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 ZMIZ1Q9ULJ6 1067 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 LHFPL6Q9Y693 200 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 CHD9Q3L8U1 2897 aa8.83□□□□□ -1
SMG6-213ENST00000573166 MEIKINA0A087WXM9 373 aa8.83□□□□□ -1
SMG6-213ENST00000573166 OR2AT4A6NND4 320 aa8.83□□□□□ -1
SMG6-213ENST00000573166 ACTL6BO94805 426 aa8.83□□□□□ -1
SMG6-213ENST00000573166 NFYBP25208 207 aa8.83□□□□□ -1
SMG6-213ENST00000573166 SLC25A35Q3KQZ1 300 aa8.83□□□□□ -1
SMG6-213ENST00000573166 EIF5AL1Q6IS14 154 aaKnown RBP8.83□□□□□ -1
SMG6-213ENST00000573166 METAP1DQ6UB28 335 aaPredicted RBP8.83□□□□□ -1
SMG6-213ENST00000573166 CATSPERDQ86XM0 798 aa8.83□□□□□ -1
SMG6-213ENST00000573166 BPIFB2Q8N4F0 458 aa8.83□□□□□ -1
SMG6-213ENST00000573166 RFLNBQ8N5W9 214 aa8.83□□□□□ -1
SMG6-213ENST00000573166 OR4K15Q8NH41 348 aa8.83□□□□□ -1
SMG6-213ENST00000573166 SNAPC3Q92966 411 aa8.83□□□□□ -1
SMG6-213ENST00000573166 SLAMF9Q96A28 289 aa8.83□□□□□ -1
SMG6-213ENST00000573166 TMEM45BQ96B21 275 aa8.83□□□□□ -1
SMG6-213ENST00000573166 LINC00470Q9BZP3 86 aa8.83□□□□□ -1
SMG6-213ENST00000573166 NARFLQ9H6Q4 476 aa8.83□□□□□ -1
SMG6-213ENST00000573166 MRPS18AQ9NVS2 196 aaKnown RBP8.83□□□□□ -1
SMG6-213ENST00000573166 H7C1Q1 480 aa8.83□□□□□ -1
SMG6-213ENST00000573166 OGG1O15527 345 aa8.83□□□□□ -1
SMG6-213ENST00000573166 CBR1P16152 277 aa8.83□□□□□ -1
SMG6-213ENST00000573166 GABRB1P18505 474 aa8.83□□□□□ -1
SMG6-213ENST00000573166 VAMP2P63027 116 aa8.83□□□□□ -1
SMG6-213ENST00000573166 MEF2DQ14814 521 aa8.83□□□□□ -1
SMG6-213ENST00000573166 MICBQ29980 383 aa8.83□□□□□ -1
SMG6-213ENST00000573166 OSR2Q8N2R0 312 aa8.83□□□□□ -1
SMG6-213ENST00000573166 SCCPDHQ8NBX0 429 aa8.83□□□□□ -1
SMG6-213ENST00000573166 BEST4Q8NFU0 473 aa8.83□□□□□ -1
SMG6-213ENST00000573166 PPA2Q9H2U2 334 aa8.83□□□□□ -1
SMG6-213ENST00000573166 GHRLQ9UBU3 117 aa8.83□□□□□ -1
SMG6-213ENST00000573166 FAM221AA4D161 298 aa8.83□□□□□ -1
SMG6-213ENST00000573166 TMEM235A6NFC5 223 aa8.83□□□□□ -1
SMG6-213ENST00000573166 SPINT2O43291 252 aa8.83□□□□□ -1
SMG6-213ENST00000573166 PPIHO43447 177 aaKnown RBP8.83□□□□□ -1
SMG6-213ENST00000573166 LYPD3O95274 346 aa8.83□□□□□ -1
SMG6-213ENST00000573166 LALBAP00709 142 aa8.83□□□□□ -1
SMG6-213ENST00000573166 IGHMP01871 453 aa8.83□□□□□ -1
SMG6-213ENST00000573166 COX6B1P14854 86 aa8.83□□□□□ -1
SMG6-213ENST00000573166 UCP2P55851 309 aa8.83□□□□□ -1
SMG6-213ENST00000573166 TAS2R46P59540 309 aa8.83□□□□□ -1
SMG6-213ENST00000573166 TLE1Q04724 770 aa8.83□□□□□ -1
SMG6-213ENST00000573166 LINC01560Q8TB33 94 aa8.83□□□□□ -1
SMG6-213ENST00000573166 RRNAD1Q96FB5 475 aaKnown RBP8.83□□□□□ -1
SMG6-213ENST00000573166 TRMT61AQ96FX7 289 aaKnown RBP8.83□□□□□ -1
SMG6-213ENST00000573166 HYLS1Q96M11 299 aa8.83□□□□□ -1
SMG6-213ENST00000573166 PRRT1Q99946 306 aa8.83□□□□□ -1
SMG6-213ENST00000573166 OCSTAMPQ9BR26 566 aa8.83□□□□□ -1
SMG6-213ENST00000573166 MS4A5Q9H3V2 200 aa8.83□□□□□ -1
SMG6-213ENST00000573166 NUDT15Q9NV35 164 aa8.83□□□□□ -1
SMG6-213ENST00000573166 MUC22E2RYF6 1773 aaPredicted RBP8.83□□□□□ -1
SMG6-213ENST00000573166 MED13LQ71F56 2210 aa8.83□□□□□ -1
SMG6-213ENST00000573166 ARPC4-TTLL3A0A0A6YYG9 625 aa8.82□□□□□ -1
SMG6-213ENST00000573166 OR5B21A6NL26 309 aa8.82□□□□□ -1
SMG6-213ENST00000573166 GDNFP39905 211 aa8.82□□□□□ -1
SMG6-213ENST00000573166 GFRA1P56159 465 aa8.82□□□□□ -1
SMG6-213ENST00000573166 TATDN3Q17R31 274 aa8.82□□□□□ -1
SMG6-213ENST00000573166 RNFT1Q5M7Z0 435 aa8.82□□□□□ -1
SMG6-213ENST00000573166 C10orf128Q5T292 105 aa8.82□□□□□ -1
SMG6-213ENST00000573166 LINC01590Q5TEZ4 76 aa8.82□□□□□ -1
SMG6-213ENST00000573166 RBMXL3Q8N7X1 1067 aaKnown RBP8.82□□□□□ -1
SMG6-213ENST00000573166 OR52N4Q8NGI2 321 aa8.82□□□□□ -1
SMG6-213ENST00000573166 ST7LQ8TDW4 575 aa8.82□□□□□ -1
SMG6-213ENST00000573166 SCMH1Q96GD3 660 aa8.82□□□□□ -1
SMG6-213ENST00000573166 HINT2Q9BX68 163 aa8.82□□□□□ -1
SMG6-213ENST00000573166 PPP1R3CQ9UQK1 317 aa8.82□□□□□ -1
SMG6-213ENST00000573166 A1L4Q6 167 aa8.82□□□□□ -1
SMG6-213ENST00000573166 PRSS44E7EML9 344 aa8.82□□□□□ -1
SMG6-213ENST00000573166 ATP6V1G2-DDX39BF2Z307 99 aa8.82□□□□□ -1
SMG6-213ENST00000573166 SFTPBP07988 381 aa8.82□□□□□ -1
SMG6-213ENST00000573166 CDK2P24941 298 aa8.82□□□□□ -1
SMG6-213ENST00000573166 PTGFRP43088 359 aa8.82□□□□□ -1
SMG6-213ENST00000573166 CRYBB2P43320 205 aa8.82□□□□□ -1
SMG6-213ENST00000573166 ARHGDIBP52566 201 aa8.82□□□□□ -1
SMG6-213ENST00000573166 RAB2AP61019 212 aa8.82□□□□□ -1
SMG6-213ENST00000573166 IGF2-ASQ6U949 168 aa8.82□□□□□ -1
SMG6-213ENST00000573166 PRSS45Q7RTY3 260 aa8.82□□□□□ -1
SMG6-213ENST00000573166 ZNF837Q96EG3 531 aaPredicted RBP8.82□□□□□ -1
SMG6-213ENST00000573166 C1orf123Q9NWV4 160 aa8.82□□□□□ -1
SMG6-213ENST00000573166 CACNG2Q9Y698 323 aa8.82□□□□□ -1
SMG6-213ENST00000573166 IGKV1D-43A0A0B4J1Z2 117 aa8.82□□□□□ -1
SMG6-213ENST00000573166 C3orf80F5H4A9 247 aa8.82□□□□□ -1
SMG6-213ENST00000573166 AKR7A2O43488 359 aa8.82□□□□□ -1
SMG6-213ENST00000573166 MT-ND4P03905 459 aa8.82□□□□□ -1
SMG6-213ENST00000573166 SERPINE2P07093 398 aa8.82□□□□□ -1
SMG6-213ENST00000573166 ELK1P19419 428 aa8.82□□□□□ -1
SMG6-213ENST00000573166 S100A10P60903 97 aa8.82□□□□□ -1
SMG6-213ENST00000573166 BEX5Q5H9J7 111 aa8.82□□□□□ -1
SMG6-213ENST00000573166 NOXA1Q86UR1 476 aa8.82□□□□□ -1
SMG6-213ENST00000573166 CCDC71LQ8N9Z2 235 aa8.82□□□□□ -1
SMG6-213ENST00000573166 TMEM54Q969K7 222 aa8.82□□□□□ -1
SMG6-213ENST00000573166 ZDHHC11Q9H8X9 412 aa8.82□□□□□ -1
SMG6-213ENST00000573166 SAP30LQ9HAJ7 183 aa8.82□□□□□ -1
SMG6-213ENST00000573166 A0A1W2PPH5 198 aa8.81□□□□□ -1
SMG6-213ENST00000573166 NAP1L6A6NFF2 107 aa8.81□□□□□ -1
SMG6-213ENST00000573166 C10orf142B7Z368 130 aa8.81□□□□□ -1
SMG6-213ENST00000573166 E9PLN8 166 aa8.81□□□□□ -1
SMG6-213ENST00000573166 ASCL1P50553 236 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms