RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CADM2Q8N3J6 435 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF439Q8NDP4 499 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 OR9A2Q8NGT5 310 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 OR4C3Q8NH37 302 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 PYURFQ96I23 114 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 C12orf57Q99622 126 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 PITX2Q99697 317 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 SULT4A1Q9BR01 284 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 MRIQ9BWK5 157 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 FAM96AQ9H5X1 160 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 RGS18Q9NS28 235 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 FAM53CQ9NYF3 392 aa4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 MRPS18CQ9Y3D5 142 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-210ENST00000572787 TRAV8-4A0A0B4J246 113 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 IGHV4-61A0A0C4DH41 118 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 PATE3B3GLJ2 98 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 TRIM49D1C9J1S8 452 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 E9PLD3 99 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 RGS14O43566 566 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 CA11O75493 328 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 STK16O75716 305 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 GLUD1P00367 558 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 PTHP01270 115 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 P01737 135 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 IGHV4-59P01825 116 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 H2AFZP0C0S5 128 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 CD79AP11912 226 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 CYBAP13498 195 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 FOLR1P15328 257 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 RCC1P18754 421 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 CD34P28906 385 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 ADORA2BP29275 332 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 TSPOP30536 169 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 CEACAM8P31997 349 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 PPICP45877 212 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 RFX2P48378 723 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 RARRES1P49788 294 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 FOXG1P55316 489 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 BIDP55957 195 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 RIPPLY3P57055 190 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 CDK10Q15131 360 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 NECTIN1Q15223 517 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 RSU1Q15404 277 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 TFDP3Q5H9I0 405 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 TEX36Q5VZQ5 186 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 TMEM215Q68D42 235 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 LAMTOR1Q6IAA8 161 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 OR10K2Q6IF99 312 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 SFXN4Q6P4A7 337 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 TOMM20LQ6UXN7 152 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 SPNS3Q6ZMD2 512 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 Q6ZVH6 145 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 AMIGO2Q86SJ2 522 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 OAFQ86UD1 273 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 TMEM86BQ8N661 226 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 SUMF1Q8NBK3 374 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 SMRP1Q8NCR6 262 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 OR6N1Q8NGY5 312 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 GRPEL2Q8TAA5 225 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 Q8TCH9 128 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 ABHD3Q8WU67 409 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 C1orf54Q8WWF1 131 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 CYGBQ8WWM9 190 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 FGF14Q92915 247 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 IL22RA2Q969J5 263 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 EXOSC8Q96B26 276 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 TAMM41Q96BW9 452 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 LRRC58Q96CX6 371 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 L3HYPDHQ96EM0 354 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 DCUN1D1Q96GG9 259 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 SMARCD1Q96GM5 515 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 C9orf85Q96MD7 179 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 FAAP24Q9BTP7 215 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC25A39Q9BZJ4 359 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 RASL12Q9NYN1 266 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 THAP10Q9P2Z0 257 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 CARHSP1Q9Y2V2 147 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 UTP11Q9Y3A2 253 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 POGZQ7Z3K3 1410 aa4.09□□□□□ -1.75
TOPBP1-210ENST00000572787 RIMS1Q86UR5 1692 aaKnown RBP4.09□□□□□ -1.76
TOPBP1-210ENST00000572787 IGHV1OR21-1A0A087WYE8 117 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 IGLV5-52A0A0A0MRZ9 124 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 A0A0G2JLM5 398 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 TMEM272A0A1B0GTI8 110 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF705EA8MWA4 302 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 EVPLLA8MZ36 301 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 ORC5O43913 435 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 PFDN1O60925 122 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 FRAT2O75474 233 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 PMS2P2O95744 297 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 SEMA4FO95754 770 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 EDN1P05305 212 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 IL3P08700 152 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 RBMY1CP0DJD4 496 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 CD37P11049 281 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 GGT1P19440 569 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 GZMHP20718 246 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 MYL9P24844 172 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 AKR1C3P42330 323 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 NR4A2P43354 598 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms