RNA–Protein interactions for RNA: ENST00000571855.1

ABCC3-218, Transcript of ATP binding cassette subfamily C member 3, human

Gene ABCC3, Length 1,562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCC3-218	ENST00000571855	ACSM1	Q08AH1	577 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	MED22	Q15528	200 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	CLEC9A	Q6UXN8	241 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	C19orf18	Q8NEA5	215 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	GPR148	Q8TDV2	347 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	LRRC29	Q8WV35	223 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	PGLYRP3	Q96LB9	341 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	WNK2	Q9Y3S1	2297 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	IGKV1-9	A0A0C4DH69	117 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	IGHV2-5	P01817	119 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	HEXA	P06865	529 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	EGR1	P18146	543 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	GZMK	P49863	264 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	FUT6	P51993	359 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	CYB5R2	Q6BCY4	276 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	HAGHL	Q6PII5	290 aa	Predicted RBP	13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	ZNF573	Q86YE8	665 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	SERPINA12	Q8IW75	414 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	MUC20	Q8N307	709 aa	Predicted RBP	13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	SPIC	Q8N5J4	248 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	PARP16	Q8N5Y8	322 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	NPRL2	Q8WTW4	380 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	ZNF665	Q9H7R5	613 aa		13.92	□□□□□ -0.18
ABCC3-218	ENST00000571855	FAM230A	A0A1W2PPH8	454 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	RHBDL1	O75783	438 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	OCM2	P0CE71	109 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	ATF1	P18846	271 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	CD80	P33681	288 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	HAAO	P46952	286 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	SOX2	P48431	317 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	GABARAPL2	P60520	117 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	RPS11	P62280	158 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	CNN3	Q15417	329 aa	Known RBP	13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	ZNF404	Q494X3	552 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	YIF1B	Q5BJH7	314 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	DEFB108B	Q8NET1	73 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	OR5D14	Q8NGL3	314 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	OR13C5	Q8NGS8	318 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	OR10Z1	Q8NGY1	313 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	AQP3	Q92482	292 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	RAB39B	Q96DA2	213 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	MSI2	Q96DH6	328 aa	Known RBP	13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	C1orf159	Q96HA4	380 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	TMEM246	Q9BRR3	403 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	ZCCHC4	Q9H5U6	513 aa		13.91	□□□□□ -0.18
ABCC3-218	ENST00000571855	SRRM5	B3KS81	715 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	C3orf80	F5H4A9	247 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	LGALS8	O00214	317 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	CD5L	O43866	347 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	CD1A	P06126	327 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	MAP2K4	P45985	399 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	DNAAF1	Q8NEP3	725 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	OR13C9	Q8NGT0	318 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	ZNF671	Q8TAW3	534 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	PATZ1	Q9HBE1	687 aa	Known RBP	13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	PCDHB10	Q9UN67	800 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	LRRC42	Q9Y546	428 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	MTOR	P42345	2549 aa		13.9	□□□□□ -0.18
ABCC3-218	ENST00000571855	IGKV1-27	A0A075B6S5	117 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	TRAV38-1	A0A0B4J264	116 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	TRBV5-5	A0A0J9YX44	114 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	OOEP	A6NGQ2	149 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	CEACAM18	A8MTB9	384 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	FAM157A	C9JC47	383 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	AKR7A2	O43488	359 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	CD2	P06729	351 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	PRKACB	P22694	351 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	AZGP1	P25311	298 aa	Known RBP	13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	TEX36	Q5VZQ5	186 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855		Q71RC1	249 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	ANGPTL5	Q86XS5	388 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	CALHM1	Q8IU99	346 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	TMEM106A	Q96A25	262 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	SPSB1	Q96BD6	273 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	BORCS8	Q96FH0	119 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855	HIVEP2	P31629	2446 aa		13.89	□□□□□ -0.19
ABCC3-218	ENST00000571855		J3QT63	122 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	SYNGR1	O43759	233 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	MRPS14	O60783	128 aa	Known RBP	13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	ALX3	O95076	343 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	OCM	P0CE72	109 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	MPZ	P25189	248 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	RBP2	P50120	134 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	GMFB	P60983	142 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	TBCE	Q15813	527 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	KCNJ8	Q15842	424 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855		Q499Y3	187 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	ASPHD2	Q6ICH7	369 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	DCDC5	Q6ZRR9	648 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	LINC01356	Q8N9X3	169 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	SEH1L	Q96EE3	360 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	OPALIN	Q96PE5	141 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	WDR13	Q9H1Z4	485 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	SON	P18583	2426 aa	Known RBP	13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855	IGHV3OR15-7	A0A075B7D8	119 aa		13.88	□□□□□ -0.19
ABCC3-218	ENST00000571855		B4DSR2	109 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms