RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ZMYND11Q15326 602 aa12.69□□□□□ -0.38
RAB40B-203ENST00000570676 TMEM155Q4W5P6 130 aa12.69□□□□□ -0.38
RAB40B-203ENST00000570676 PGAP1Q75T13 922 aa12.69□□□□□ -0.38
RAB40B-203ENST00000570676 PEG10Q86TG7 708 aaKnown RBP12.69□□□□□ -0.38
RAB40B-203ENST00000570676 OR8G5Q8NG78 346 aa12.69□□□□□ -0.38
RAB40B-203ENST00000570676 OR51A4Q8NGJ6 313 aa12.69□□□□□ -0.38
RAB40B-203ENST00000570676 OR13C3Q8NGS6 347 aa12.69□□□□□ -0.38
RAB40B-203ENST00000570676 TSEN15Q8WW01 171 aaKnown RBP12.69□□□□□ -0.38
RAB40B-203ENST00000570676 hCG_38984A0A1B0GV85 526 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 F5H0A9 414 aaPredicted RBP12.68□□□□□ -0.38
RAB40B-203ENST00000570676 H0YL77 283 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 J3QLI3 93 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 MTRF1O75570 445 aaKnown RBP12.68□□□□□ -0.38
RAB40B-203ENST00000570676 RGS9O75916 674 aaPredicted RBP12.68□□□□□ -0.38
RAB40B-203ENST00000570676 FSHBP01225 129 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 HLA-DPB1P04440 258 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 OCM2P0CE71 109 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 ZNF12P17014 697 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 EPHA1P21709 976 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 GADD45AP24522 165 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 ZFP36P26651 326 aaKnown RBP12.68□□□□□ -0.38
RAB40B-203ENST00000570676 SOX2P48431 317 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 GSK3AP49840 483 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 SEC61A1P61619 476 aaKnown RBP12.68□□□□□ -0.38
RAB40B-203ENST00000570676 BTG1P62324 171 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 LCN2P80188 198 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 FAM3AP98173 230 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 FABP5Q01469 135 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 INSL4Q14641 139 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 ACSM3Q53FZ2 586 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 DCAF12L2Q5VW00 463 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 GPR107Q5VW38 600 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 PLPP7Q8NBV4 271 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 CCDC54Q8NEL0 328 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 OR14K1Q8NGZ2 314 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 MEGF10Q96KG7 1140 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 SLC30A2Q9BRI3 323 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 FUNDC2Q9BWH2 189 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 OR51E2Q9H255 320 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 GCM1Q9NP62 436 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 OPN4Q9UHM6 478 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 STUB1Q9UNE7 303 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 DHDHQ9UQ10 334 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 PPP1R3CQ9UQK1 317 aa12.68□□□□□ -0.38
RAB40B-203ENST00000570676 A0A0A6YYJ9 748 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 TRBV5-5A0A0J9YX44 114 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 GGT3PA6NGU5 568 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 A8MXK9 166 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 ZNF879B4DU55 563 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 TMEM178BH3BS89 294 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 GABRPO00591 440 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 DHRS3O75911 302 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 ADRA2CP18825 462 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 GATA3P23771 443 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 MAP2K3P46734 347 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 Q499Y3 187 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 CD200R1LQ6Q8B3 271 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 Q6ZSR3 168 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 CEACAM19Q7Z692 300 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 LRRC28Q86X40 367 aaPredicted RBP12.67□□□□□ -0.38
RAB40B-203ENST00000570676 SPICQ8N5J4 248 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.67□□□□□ -0.38
RAB40B-203ENST00000570676 BHLHE23Q8NDY6 225 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 OR14A2Q96R54 314 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 CHCHD6Q9BRQ6 235 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 OCEL1Q9H607 264 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 PLEKHA1Q9HB21 404 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 PATZ1Q9HBE1 687 aaKnown RBP12.67□□□□□ -0.38
RAB40B-203ENST00000570676 EXOSC4Q9NPD3 245 aaKnown RBP12.67□□□□□ -0.38
RAB40B-203ENST00000570676 SSR3Q9UNL2 185 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 POLR3KQ9Y2Y1 108 aaPredicted RBP12.67□□□□□ -0.38
RAB40B-203ENST00000570676 V9GYS6 101 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 ANK2Q01484 3957 aa12.67□□□□□ -0.38
RAB40B-203ENST00000570676 PPIAL4EA0A075B759 164 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 PPIAL4CA0A0B4J2A2 164 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 LOC100506127A0A0U1RQW1 187 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 TRDV1A0A1B0GX56 115 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 CD300LBA8K4G0 201 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 PPIAL4DF5H284 164 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 F5H5P2 479 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 AIREO43918 545 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 FOXH1O75593 365 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 GPX5O75715 221 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 PPIAL4FP0DN26 164 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 SELEP16581 610 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 ZNF20P17024 532 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 ACKR3P25106 362 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 RIPPLY1Q0D2K3 151 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 SCGB2A2Q13296 93 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 OR8B8Q15620 311 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 TIMM50Q3ZCQ8 353 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 TMEM91Q6ZNR0 172 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 CLVS1Q8IUQ0 354 aaPredicted RBP12.66□□□□□ -0.38
RAB40B-203ENST00000570676 TEX29Q8N6K0 151 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 DEFB108BQ8NET1 73 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 OR56B2PQ8NGI1 322 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 OR13G1Q8NGZ3 307 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 ZNF420Q8TAQ5 688 aaPredicted RBP12.66□□□□□ -0.38
RAB40B-203ENST00000570676 THRSPQ92748 146 aa12.66□□□□□ -0.38
RAB40B-203ENST00000570676 TMEM106AQ96A25 262 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms