RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 THADAQ6YHU6 1953 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 WRBO00258 174 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 TPPPO94811 219 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 HPNP05981 417 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 P2RY4P51582 365 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 OR5AS1Q8N127 324 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 OR4A4PQ8NGN8 299 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 ALKBH3Q96Q83 286 aaPredicted RBP13.48□□□□□ -0.25
USP43-202ENST00000570475 EDEM2Q9BV94 578 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 PTRH2Q9Y3E5 179 aaKnown RBP13.48□□□□□ -0.25
USP43-202ENST00000570475 RBM7Q9Y580 266 aaKnown RBP13.48□□□□□ -0.25
USP43-202ENST00000570475 RAB19A4D1S5 217 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 IFI6P09912 130 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 MIDNQ504T8 468 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 GUSBP11Q6P575 273 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 DNM1P46Q6ZS02 220 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 YRDCQ86U90 279 aaKnown RBP13.48□□□□□ -0.25
USP43-202ENST00000570475 APCDD1LQ8NCL9 501 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 TMEM230Q96A57 120 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 CLCC1Q96S66 551 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 MMP26Q9NRE1 261 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 MYOTQ9UBF9 498 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 ATPIF1Q9UII2 106 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 RCL1Q9Y2P8 373 aaKnown RBP13.48□□□□□ -0.25
USP43-202ENST00000570475 IGHV3-64DA0A0J9YX35 117 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 TP53I11O14683 189 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 LDLRAD4O15165 306 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 ZNF44P15621 663 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 GGNBP1Q5YKI7 109 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 SYT13Q7L8C5 426 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 SRPK3Q9UPE1 567 aa13.48□□□□□ -0.25
USP43-202ENST00000570475 PI4KAP42356 2102 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 ZNF407Q9C0G0 2248 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 IGKV1D-8A0A087WSZ0 117 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 BORCS7-ASMTA0A0B4J1R7 106 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 DHRS7CA6NNS2 312 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 TMEM14DPA8MWL7 114 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 ZNF728P0DKX0 622 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 GLB1P16278 677 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 EPHA1P21709 976 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 FPR2P25090 351 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 GNRHRP30968 328 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 F2RL1P55085 397 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 PPA1Q15181 289 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 PABPC1L2AQ5JQF8 200 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 TMEM182Q6ZP80 229 aaPredicted RBP13.47□□□□□ -0.25
USP43-202ENST00000570475 OR9K2Q8NGE7 335 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 SGK3Q96BR1 496 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 NRIP2Q9BQI9 281 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 RAB18Q9NP72 206 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 UBE2J1Q9Y385 318 aaPredicted RBP13.47□□□□□ -0.25
USP43-202ENST00000570475 DENND4AQ7Z401 1863 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 A0A1B0GTQ1 180 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 B4GALT1P15291 398 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 DUSP1P28562 367 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 GALNSP34059 522 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 NOVA1P51513 510 aaKnown RBP13.47□□□□□ -0.25
USP43-202ENST00000570475 SLC22A25Q6T423 547 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 SLC25A45Q8N413 288 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 PRR18Q8N4B5 295 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 GJC3Q8NFK1 279 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 ASB13Q8WXK3 278 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 ZNF501Q96CX3 271 aaPredicted RBP13.47□□□□□ -0.25
USP43-202ENST00000570475 KIRREL1Q96J84 757 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 PECRQ9BY49 303 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 KCNJ16Q9NPI9 418 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 NIT2Q9NQR4 276 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 ZNF581Q9P0T4 197 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 NCOA6Q14686 2063 aaPredicted RBP13.47□□□□□ -0.25
USP43-202ENST00000570475 MSR1P21757 451 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 HTR5AP47898 357 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 ZNF84P51523 738 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 ACTBL2Q562R1 376 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 COL13A1Q5TAT6 717 aaPredicted RBP13.47□□□□□ -0.25
USP43-202ENST00000570475 UQCC3Q6UW78 93 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 RTN4IP1Q8WWV3 396 aaPredicted RBP13.47□□□□□ -0.25
USP43-202ENST00000570475 EMG1Q92979 244 aaKnown RBP13.47□□□□□ -0.25
USP43-202ENST00000570475 NMES1Q9C002 83 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 ZNF576Q9H609 170 aa13.47□□□□□ -0.25
USP43-202ENST00000570475 BARX1Q9HBU1 254 aaPredicted RBP13.47□□□□□ -0.25
USP43-202ENST00000570475 TNFSF11O14788 317 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 OR5AC1P0C628 307 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 GLP1RP43220 463 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 UBE2V2Q15819 145 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 LYZL2Q7Z4W2 148 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 PPP1R3BQ86XI6 285 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 OR14L1PQ8NHC6 308 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 MRGPRX4Q96LA9 322 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 OXGR1Q96P68 337 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 IGKV1-9A0A0C4DH69 117 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 hCG_1809904A0A1W2PP81 198 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 A0A1W2PR64 198 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 A0A1W2PRV1 198 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 E9PLN8 166 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 RFC3P40938 356 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 FAM189A2Q15884 450 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 PLXDC2Q6UX71 529 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 Q7L0L9 218 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 D2HGDHQ8N465 521 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 FAM24BQ8N5W8 94 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms