RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 EPHA2P29317 976 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 PROK1P58294 105 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 IL5RAQ01344 420 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 NXNL2Q5VZ03 156 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 METAP1DQ6UB28 335 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 BCDIN3DQ7Z5W3 292 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 TCEANCQ8N8B7 351 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 RNF170Q96K19 258 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 CNN2Q99439 309 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 TEAD3Q99594 435 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 RTL8AQ9BWD3 113 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 YIPF3Q9GZM5 350 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 OR51I2Q9H344 312 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 NIPAL2Q9H841 368 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 H2AFY2Q9P0M6 372 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 ZNRD1Q9P1U0 126 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 ZNF391Q9UJN7 358 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 MAB21L2Q9Y586 359 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 TMEM14AQ9Y6G1 99 aa11.34□□□□□ -0.59
GTF3C1-211ENST00000569653 TMEM210A6NLX4 147 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 ANXA2P2A6NMY6 339 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 NDUFB3O43676 98 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 SRSF10O75494 262 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 GPM6AP51674 278 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 CEP78Q5JTW2 689 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 KCTD18Q6PI47 426 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 Q6ZSV7 163 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 MEPCEQ7L2J0 689 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 SLC36A1Q7Z2H8 476 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 KRT77Q7Z794 578 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 ZDHHC23Q8IYP9 409 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 PQLC1Q8N2U9 271 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 ASB17Q8WXJ9 295 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 DYRK2Q92630 601 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 ZNF488Q96MN9 340 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 BEX1Q9HBH7 125 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 USE1Q9NZ43 259 aa11.33□□□□□ -0.6
GTF3C1-211ENST00000569653 EI24O14681 340 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 NPFFO15130 113 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 SIGLEC5O15389 551 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 ALPLP05186 524 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 ACAA1P09110 424 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 PSG2P11465 335 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 FAHP16930 419 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 PAX6P26367 422 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 POLR2IP36954 125 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 ALDH3A2P51648 485 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 CDC42P60953 191 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 EFNB1P98172 346 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 DEFA6Q01524 100 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 SNCBQ16143 134 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 AADACL4Q5VUY2 407 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 ASPHD2Q6ICH7 369 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 DEGS2Q6QHC5 323 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 KCTD8Q6ZWB6 473 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 ZSCAN4Q8NAM6 433 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 ZNRF1Q8ND25 227 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 H1FXQ92522 213 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 OR8B4Q96RC9 309 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 IL4I1Q96RQ9 567 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 MNTQ99583 582 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 GPR84Q9NQS5 396 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 NLKQ9UBE8 527 aa11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 SLC25A10Q9UBX3 287 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-211ENST00000569653 A0A0U1RQV5 110 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 ZNF816-ZNF321PA0A0X1KG74 233 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 A0A1B0GUS0 222 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 OR2AT4A6NND4 320 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 ZNF732B4DXR9 585 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 CLPXO76031 633 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 TTRP02766 147 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 CRYBA1P05813 215 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 SAA4P35542 130 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 ROM1Q03395 351 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 LRRC10Q5BKY1 277 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 HIST2H2BDQ6DRA6 164 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 PLEKHG7Q6ZR37 379 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 FTMTQ8N4E7 242 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 CD177Q8N6Q3 437 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 OR8J1Q8NGP2 316 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 TBC1D15Q8TC07 691 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 OR51E1Q8TCB6 317 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 AQP3Q92482 292 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 STMN2Q93045 179 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 SLC29A1Q99808 456 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 C9orf16Q9BUW7 83 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 MROQ9BYG7 248 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 PBOV1Q9GZY1 135 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 DNTTIP1Q9H147 329 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 C19orf12Q9NSK7 152 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 IMPAD1Q9NX62 359 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 RNF114Q9Y508 228 aa11.31□□□□□ -0.6
GTF3C1-211ENST00000569653 A0A1B0GTI1 187 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 TMEM269A0A1B0GVZ9 245 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 NKX6-3A6NJ46 265 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 SYNGR1O43759 233 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 ZNF254O75437 659 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 BAG2O95816 211 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 TSPAN15O95858 294 aa11.3□□□□□ -0.6
GTF3C1-211ENST00000569653 CEBPDP49716 269 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms