RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 KISS1Q15726 138 aa19.85■□□□□ 0.77
RAB40C-212ENST00000569575 SAXO1Q8IYX7 474 aa19.85■□□□□ 0.77
RAB40C-212ENST00000569575 TMIGD2Q96BF3 282 aa19.85■□□□□ 0.77
RAB40C-212ENST00000569575 NDUFA13Q9P0J0 144 aa19.85■□□□□ 0.77
RAB40C-212ENST00000569575 CENPEQ02224 2701 aa19.85■□□□□ 0.77
RAB40C-212ENST00000569575 DCHS2Q6V1P9 2916 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 TRAV8-7A0A075B6U6 113 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 FAM230AA0A1W2PPH8 454 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 J3QT63 122 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 DAOP14920 347 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 ZNF93P35789 620 aaPredicted RBP19.84■□□□□ 0.77
RAB40C-212ENST00000569575 TMEM33P57088 247 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 C22orf42Q6IC83 251 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 PRSS57Q6UWY2 283 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 CDH24Q86UP0 819 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 MKXQ8IYA7 352 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 RAB2BQ8WUD1 216 aa19.84■□□□□ 0.77
RAB40C-212ENST00000569575 METTL17Q9H7H0 456 aaPredicted RBP19.84■□□□□ 0.77
RAB40C-212ENST00000569575 USF3Q68DE3 2245 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 NDUFS8O00217 210 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 NOS1APO75052 506 aaPredicted RBP19.83■□□□□ 0.77
RAB40C-212ENST00000569575 NCR1O76036 304 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 GABARAPO95166 117 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 HPXP02790 462 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 GRPP07492 148 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 HAAOP46952 286 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 CAPZA1P52907 286 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 DDI2Q5TDH0 399 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 LRRTM1Q86UE6 522 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 SCCPDHQ8NBX0 429 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 ZNF420Q8TAQ5 688 aaPredicted RBP19.83■□□□□ 0.77
RAB40C-212ENST00000569575 NRGNQ92686 78 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 PPIL3Q9H2H8 161 aaKnown RBP19.83■□□□□ 0.77
RAB40C-212ENST00000569575 PPP1R3EQ9H7J1 279 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 CHODLQ9H9P2 273 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 PCDHB16Q9NRJ7 776 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 GHRLQ9UBU3 117 aa19.83■□□□□ 0.77
RAB40C-212ENST00000569575 CHD3Q12873 2000 aaKnown RBP19.83■□□□□ 0.76
RAB40C-212ENST00000569575 CRYBG3Q68DQ2 2970 aa19.83■□□□□ 0.76
RAB40C-212ENST00000569575 LOC100506127A0A0U1RQW1 187 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 MAS1P04201 325 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 FAM27D1Q5T7N8 215 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 PEG10Q86TG7 708 aaKnown RBP19.82■□□□□ 0.76
RAB40C-212ENST00000569575 WDR86Q86TI4 376 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 CROCCP3Q8IVE0 287 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 Q8IYB0 196 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 PXT1Q8NFP0 134 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 OR51A2Q8NGJ7 313 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 TRMT10AQ8TBZ6 339 aaKnown RBP19.82■□□□□ 0.76
RAB40C-212ENST00000569575 AQP3Q92482 292 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 DVL3Q92997 716 aaPredicted RBP19.82■□□□□ 0.76
RAB40C-212ENST00000569575 GPER1Q99527 375 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 RASL12Q9NYN1 266 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 RNF7Q9UBF6 113 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 ABCA12Q86UK0 2595 aa19.82■□□□□ 0.76
RAB40C-212ENST00000569575 ARID1AO14497 2285 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 CELSR2Q9HCU4 2923 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 A6NLC8 198 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 NOL3O60936 208 aaKnown RBP19.81■□□□□ 0.76
RAB40C-212ENST00000569575 IGHV4-39P01824 125 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 CFPP27918 469 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 BMXP51813 675 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 PDZK1IP1Q13113 114 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 GPR107Q5VW38 600 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 C11orf53Q8IXP5 236 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 OR52N4Q8NGI2 321 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 FGF23Q9GZV9 251 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-212ENST00000569575 TMEM106BQ9NUM4 274 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 NPTNQ9Y639 398 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 V9GY05 133 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 TANC2Q9HCD6 1990 aa19.81■□□□□ 0.76
RAB40C-212ENST00000569575 ZNF701M0R085 212 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-212ENST00000569575 CDIPTO14735 213 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 ZNF780AO75290 641 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-212ENST00000569575 RAB3BP20337 219 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 GIFP27352 417 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 PDLIM4P50479 330 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 GPR176Q14439 515 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 MPPED2Q15777 294 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 C1orf100Q5SVJ3 147 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 HAGHLQ6PII5 290 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-212ENST00000569575 WDR82Q6UXN9 313 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 ASCL4Q6XD76 172 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 MOGAT3Q86VF5 341 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 FAM90A1Q86YD7 464 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 NPRL2Q8WTW4 380 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 TIMD4Q96H15 378 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 FOXC2Q99958 501 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 CENPOQ9BU64 300 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 C1orf123Q9NWV4 160 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 DYSFO75923 2080 aa19.8■□□□□ 0.76
RAB40C-212ENST00000569575 IGKV1-27A0A075B6S5 117 aa19.79■□□□□ 0.76
RAB40C-212ENST00000569575 SMIM31A0A1B0GVY4 71 aa19.79■□□□□ 0.76
RAB40C-212ENST00000569575 LHBP01229 141 aa19.79■□□□□ 0.76
RAB40C-212ENST00000569575 IL1AP01583 271 aa19.79■□□□□ 0.76
RAB40C-212ENST00000569575 UBBP0CG47 229 aa19.79■□□□□ 0.76
RAB40C-212ENST00000569575 CPT2P23786 658 aa19.79■□□□□ 0.76
RAB40C-212ENST00000569575 PTGFRP43088 359 aa19.79■□□□□ 0.76
RAB40C-212ENST00000569575 PRAMEF6Q5VXH4 476 aa19.79■□□□□ 0.76
RAB40C-212ENST00000569575 SHEQ5VZ18 495 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms