RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 DUX4L7P0CJ90 424 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 GLRA1P23415 457 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 TGM4P49221 684 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 CAV3P56539 151 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ARF6P62330 175 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 IL13RA1P78552 427 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 MFGE8Q08431 387 aaPredicted RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 IKZF1Q13422 519 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DEFB112Q30KQ8 113 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 CEP78Q5JTW2 689 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ZNF684Q5T5D7 378 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 BCL2L15Q5TBC7 163 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 PLCXD3Q63HM9 321 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 RUSC1-AS1Q66K80 236 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 C16orf87Q6PH81 154 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DUX4L9Q6RFH8 374 aaPredicted RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 ZNF322Q6U7Q0 402 aaPredicted RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 METAP1DQ6UB28 335 aaPredicted RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 Q6YL49 198 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ZNF788Q6ZQV5 615 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 BCDIN3DQ7Z5W3 292 aaKnown RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 AMIGO2Q86SJ2 522 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 SLC35F2Q8IXU6 374 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ELMOD2Q8IZ81 293 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 CMTM4Q8IZR5 234 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 TMEM86BQ8N661 226 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 KIR3DL3Q8N743 410 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 FAM216BQ8N7L0 139 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 OR2T27Q8NH04 317 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ANGPTL6Q8NI99 470 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 C8orf46Q8TAG6 207 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ZNF671Q8TAW3 534 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 NPRL2Q8WTW4 380 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 RPL3LQ92901 407 aaKnown RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 LHX4Q969G2 390 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 SEH1LQ96EE3 360 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 CENPNQ96H22 339 aaPredicted RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 MED30Q96HR3 178 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 FAM71F1Q96KD3 344 aaPredicted RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 IL4I1Q96RQ9 567 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 TBX15Q96SF7 602 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 RBM4BQ9BQ04 359 aaKnown RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 DCTN5Q9BTE1 182 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 TTTY10Q9BZA0 68 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 FGF23Q9GZV9 251 aaPredicted RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 SIRPDQ9H106 197 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 WDR13Q9H1Z4 485 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 OR51I2Q9H344 312 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ADGRL4Q9HBW9 690 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ACOXLQ9NUZ1 547 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 RASL12Q9NYN1 266 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ONECUT1Q9UBC0 465 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 NLKQ9UBE8 527 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DNAJB11Q9UBS4 358 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DUX4Q9UBX2 424 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 WARS2Q9UGM6 360 aaKnown RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 ENPP5Q9UJA9 477 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 OR52A1Q9UKL2 312 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 OAZ3Q9UMX2 235 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 GTF2A1LQ9UNN4 478 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 PIGLQ9Y2B2 252 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 SNX5Q9Y5X3 404 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 SOX21Q9Y651 276 aaPredicted RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 POMT1Q9Y6A1 747 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 R4GMQ9 66 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 A0A1W2PQL4 384 aaPredicted RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 M0R1W7 72 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 DLGAP1O14490 977 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 SIGLEC5O15389 551 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 FBXO24O75426 580 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 RHBDL1O75783 438 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 KRT8P05787 483 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 MELTFP08582 738 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 ACAA1P09110 424 aaPredicted RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 PGA5P0DJD9 388 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 PSG2P11465 335 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 SELLP14151 372 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 FAHP16930 419 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 ATF4P18848 351 aaPredicted RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 AMY2BP19961 511 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 CCL1P22362 96 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 HTR1FP30939 366 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 POLR2IP36954 125 aaKnown RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 GABRA2P47869 451 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 CDC42P60953 191 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 GMFBP60983 142 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 RPL15P61313 204 aaKnown RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 ELF3P78545 371 aaPredicted RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 TMED1Q13445 227 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 DGUOKQ16854 277 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 SMIM21Q3B7S5 101 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 CLVS2Q5SYC1 327 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 TMEM42Q69YG0 159 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 HAGHLQ6PII5 290 aaPredicted RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 SHISA2Q6UWI4 295 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 C1orf122Q6ZSJ8 110 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 Q6ZSR3 168 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 MOB3CQ70IA8 216 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms