RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 SCN3BQ9NY72 215 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 LGALS8O00214 317 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 OGG1O15527 345 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 RHBDL1O75783 438 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 GATBO75879 557 aaKnown RBP14.4□□□□□ -0.1
COMMD4-220ENST00000567720 ZNF20P17024 532 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 IRF3Q14653 427 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 RNLSQ5VYX0 342 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 DMKNQ6E0U4 476 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-220ENST00000567720 SFRP4Q6FHJ7 346 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-220ENST00000567720 HAGHLQ6PII5 290 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-220ENST00000567720 FAM90A1Q86YD7 464 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 NANOGP1Q8N7R0 232 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 LINC01356Q8N9X3 169 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 PP6455Q8WZ26 134 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 MYDGFQ969H8 173 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 FGGYQ96C11 551 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 SEH1LQ96EE3 360 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 PGLYRP3Q96LB9 341 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 CDCA4Q9BXL8 241 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 PATZ1Q9HBE1 687 aaKnown RBP14.4□□□□□ -0.1
COMMD4-220ENST00000567720 LSM2Q9Y333 95 aaKnown RBP14.4□□□□□ -0.1
COMMD4-220ENST00000567720 TPRKBQ9Y3C4 175 aa14.4□□□□□ -0.1
COMMD4-220ENST00000567720 C2CD3Q4AC94 2353 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 IGKV1-27A0A075B6S5 117 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 IGHV3OR15-7A0A075B7D8 119 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 IGKV1-9A0A0C4DH69 117 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 OOEPA6NGQ2 149 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 B4DSR2 109 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 INAFM1C9JVW0 142 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 MT-ND2P03891 347 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 MSMBP08118 114 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 RPS2P15880 293 aaKnown RBP14.39□□□□□ -0.11
COMMD4-220ENST00000567720 CFHR2P36980 270 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 TEX36Q5VZQ5 186 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 FAM166AQ6J272 317 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 UTS2BQ765I0 119 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 DEFB108BQ8NET1 73 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 OR13C5Q8NGS8 318 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 OR10Z1Q8NGY1 313 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 TSEN15Q8WW01 171 aaKnown RBP14.39□□□□□ -0.11
COMMD4-220ENST00000567720 AQP3Q92482 292 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 MND1Q9BWT6 205 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 YAE1D1Q9NRH1 226 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 CUBNO60494 3623 aa14.39□□□□□ -0.11
COMMD4-220ENST00000567720 PNMA8CA0A1B0GUJ8 204 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 A8MV72 311 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-220ENST00000567720 J3QT63 122 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 AKR7A2O43488 359 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 SYNGR1O43759 233 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 TGFAP01135 160 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 HAAOP46952 286 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 TAS2R43P59537 309 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 GMFBP60983 142 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 CNN3Q15417 329 aaKnown RBP14.38□□□□□ -0.11
COMMD4-220ENST00000567720 ASPHD2Q6ICH7 369 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 LYPD2Q6UXB3 125 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 DCDC5Q6ZRR9 648 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 CALHM1Q8IU99 346 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 OR13C9Q8NGT0 318 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 OR51F2Q8NH61 342 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 TECTBQ96PL2 329 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 OR5M11Q96RB7 305 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 WDR13Q9H1Z4 485 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 CTSZQ9UBR2 303 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 PCDHB10Q9UN67 800 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 DHDHQ9UQ10 334 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 ERGIC3Q9Y282 383 aa14.38□□□□□ -0.11
COMMD4-220ENST00000567720 MXRA5Q9NR99 2828 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 FAM230AA0A1W2PPH8 454 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 KIAA1324LA8MWY0 1029 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-220ENST00000567720 A8MXK9 166 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 DENRO43583 198 aaKnown RBP14.37□□□□□ -0.11
COMMD4-220ENST00000567720 RGS10O43665 173 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 MPZP25189 248 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 AZGP1P25311 298 aaKnown RBP14.37□□□□□ -0.11
COMMD4-220ENST00000567720 SOX2P48431 317 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 RBM48Q5RL73 367 aaKnown RBP14.37□□□□□ -0.11
COMMD4-220ENST00000567720 ZNF573Q86YE8 665 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 PARP16Q8N5Y8 322 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 GPR148Q8TDV2 347 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 ZNF488Q96MN9 340 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 Q9H521 79 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 KCNS2Q9ULS6 477 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 SLC7A11Q9UPY5 501 aa14.37□□□□□ -0.11
COMMD4-220ENST00000567720 TRAV38-1A0A0B4J264 116 aa14.36□□□□□ -0.11
COMMD4-220ENST00000567720 PLPP2O43688 288 aa14.36□□□□□ -0.11
COMMD4-220ENST00000567720 GYPAP02724 150 aa14.36□□□□□ -0.11
COMMD4-220ENST00000567720 RPSAP08865 295 aaKnown RBP14.36□□□□□ -0.11
COMMD4-220ENST00000567720 WNT2P09544 360 aa14.36□□□□□ -0.11
COMMD4-220ENST00000567720 PGA5P0DJD9 388 aa14.36□□□□□ -0.11
COMMD4-220ENST00000567720 ATF1P18846 271 aa14.36□□□□□ -0.11
COMMD4-220ENST00000567720 ZFP36P26651 326 aaKnown RBP14.36□□□□□ -0.11
COMMD4-220ENST00000567720 DVL1P1P54792 670 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-220ENST00000567720 RPS11P62280 158 aaKnown RBP eCLIP14.36□□□□□ -0.11
COMMD4-220ENST00000567720 LCN2P80188 198 aa14.36□□□□□ -0.11
COMMD4-220ENST00000567720 STUMQ69YW2 141 aa14.36□□□□□ -0.11
COMMD4-220ENST00000567720 PRSS48Q7RTY5 328 aa14.36□□□□□ -0.11
COMMD4-220ENST00000567720 GLCCI1Q86VQ1 547 aa14.36□□□□□ -0.11
COMMD4-220ENST00000567720 ANGPTL5Q86XS5 388 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms