RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	GNG3	P63215	75 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	FOXL1	Q12952	345 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	SLC9A3R2	Q15599	337 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	LRRC10	Q5BKY1	277 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF684	Q5T5D7	378 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	BCL2L15	Q5TBC7	163 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZBTB37	Q5TC79	503 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	LPCAT4	Q643R3	524 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	BRD3OS	Q6XYD6	125 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	ELMOD2	Q8IZ81	293 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	YIPF7	Q8N8F6	280 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	OR8J1	Q8NGP2	316 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	OR2T27	Q8NH04	317 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	HPSE2	Q8WWQ2	592 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	FAM71F1	Q96KD3	344 aa	Predicted RBP	5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	DMRTB1	Q96MA1	342 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	C1orf147	Q96MC9	270 aa	Predicted RBP	5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	DUX5	Q96PT3	197 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	TBX15	Q96SF7	602 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	RBM4B	Q9BQ04	359 aa	Known RBP	5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	TTTY10	Q9BZA0	68 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	SIRPD	Q9H106	197 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	WDR13	Q9H1Z4	485 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	PRDM13	Q9H4Q3	707 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	NOX4	Q9NPH5	578 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	SNTG1	Q9NSN8	517 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	ENPP5	Q9UJA9	477 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	RPUSD1	Q9UJJ7	312 aa	Known RBP	5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	OAZ3	Q9UMX2	235 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	GTF2A1L	Q9UNN4	478 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	PIGL	Q9Y2B2	252 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	SNX5	Q9Y5X3	404 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	IGHV1-69D	A0A0B4J2H0	117 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1B0GTI1	187 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1W2PQL4	384 aa	Predicted RBP	5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	METTL15	A6NJ78	407 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	SAC3D1	A6NKF1	404 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR5B21	A6NL26	309 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR2AT4	A6NND4	320 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	RHBDL1	O75783	438 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	SULT1C4	O75897	302 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	DHRS3	O75911	302 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	IGLV3-1	P01715	115 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	IGHV1-69	P01742	117 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	KRT8	P05787	483 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	RNASE1	P07998	156 aa	Known RBP	5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	ACAA1	P09110	424 aa	Predicted RBP	5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	FAH	P16930	419 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	AMY2B	P19961	511 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	GLRA1	P23415	457 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	HTR1F	P30939	366 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	GABRA2	P47869	451 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	CDC42	P60953	191 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	IL13RA1	P78552	427 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	MFGE8	Q08431	387 aa	Predicted RBP	5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	CBX3	Q13185	183 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	IKZF1	Q13422	519 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	DEFB112	Q30KQ8	113 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	CDON	Q4KMG0	1287 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	AWAT1	Q58HT5	328 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	DMRTC1	Q5HYR2	192 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	CEP78	Q5JTW2	689 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	CLVS2	Q5SYC1	327 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	PLCXD3	Q63HM9	321 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	STUM	Q69YW2	141 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	C16orf87	Q6PH81	154 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635		Q6YL49	198 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF788	Q6ZQV5	615 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZBTB49	Q6ZSB9	765 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	C1orf122	Q6ZSJ8	110 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF554	Q86TJ5	538 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	CMTM4	Q8IZR5	234 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	FGFRL1	Q8N441	504 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	FAM216B	Q8N7L0	139 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	LY6G5B	Q8NDX9	201 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR51G2	Q8NGK0	314 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	ANGPTL6	Q8NI99	470 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	TRUB1	Q8WWH5	349 aa	Known RBP	5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	GATAD2B	Q8WXI9	593 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	AQP3	Q92482	292 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	LHX4	Q969G2	390 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	RFK	Q969G6	155 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	TMIGD2	Q96BF3	282 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	TBX5	Q99593	518 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF184	Q99676	751 aa	Predicted RBP	5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	GABARAPL3	Q9BY60	117 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	FGF23	Q9GZV9	251 aa	Predicted RBP	5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	RIBC2	Q9H4K1	309 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	MOB1A	Q9H8S9	216 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	C8orf4	Q9NR00	106 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	RASL12	Q9NYN1	266 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	NDUFA13	Q9P0J0	144 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	NLK	Q9UBE8	527 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	MRM2	Q9UI43	246 aa	Known RBP	5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR52A1	Q9UKL2	312 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	SLC22A13	Q9Y226	551 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	ORC6	Q9Y5N6	252 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635	KPTN	Q9Y664	436 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635		R4GMQ9	66 aa		5.71	□□□□□ -1.5
SF3B3-209	ENST00000567635		V9GYS6	101 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms