RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 GPM6AP51674 278 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 DVL1P1P54792 670 aaPredicted RBP10.37□□□□□ -0.75
RNF40-211ENST00000567365 SEC61A1P61619 476 aaKnown RBP10.37□□□□□ -0.75
RNF40-211ENST00000567365 PLCXD3Q63HM9 321 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 ASPHD2Q6ICH7 369 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 ZNF529Q6P280 563 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 CRIP3Q6Q6R5 217 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 TMPRSS11AQ6ZMR5 421 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 ZNF841Q6ZN19 808 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 DCDC5Q6ZRR9 648 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 MOB3CQ70IA8 216 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 GATAD2BQ8WXI9 593 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 PP6455Q8WZ26 134 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 AQP3Q92482 292 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 DACT3Q96B18 629 aaPredicted RBP10.37□□□□□ -0.75
RNF40-211ENST00000567365 RAB39BQ96DA2 213 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 PGLYRP3Q96LB9 341 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 ZNF184Q99676 751 aaPredicted RBP10.37□□□□□ -0.75
RNF40-211ENST00000567365 UBAP1Q9NZ09 502 aa10.37□□□□□ -0.75
RNF40-211ENST00000567365 LSM2Q9Y333 95 aaKnown RBP10.37□□□□□ -0.75
RNF40-211ENST00000567365 IGKV1-27A0A075B6S5 117 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 TRBV2A0A0J9YWF9 115 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 ISPDA4D126 451 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 OOEPA6NGQ2 149 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 INAFM1C9JVW0 142 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 C3orf80F5H4A9 247 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 DENRO43583 198 aaKnown RBP10.36□□□□□ -0.75
RNF40-211ENST00000567365 NOS1APO75052 506 aaPredicted RBP10.36□□□□□ -0.75
RNF40-211ENST00000567365 RHBDL1O75783 438 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 ALX3O95076 343 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 TGFAP01135 160 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 MSMBP08118 114 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 ACAA1P09110 424 aaPredicted RBP10.36□□□□□ -0.75
RNF40-211ENST00000567365 ZFP36P26651 326 aaKnown RBP10.36□□□□□ -0.75
RNF40-211ENST00000567365 CD80P33681 288 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 RPS11P62280 158 aaKnown RBP eCLIP10.36□□□□□ -0.75
RNF40-211ENST00000567365 PAX2Q02962 417 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 ACSM1Q08AH1 577 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 FAM166AQ6J272 317 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 LYPD2Q6UXB3 125 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 FAM90A1Q86YD7 464 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 CALHM1Q8IU99 346 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 STX19Q8N4C7 294 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 PARP16Q8N5Y8 322 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 ZNF676Q8N7Q3 588 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 C19orf18Q8NEA5 215 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 DNAAF1Q8NEP3 725 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 OR5AK2Q8NH90 309 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 LRRC29Q8WV35 223 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 FGGYQ96C11 551 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 SMIM19Q96E16 107 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 TECTBQ96PL2 329 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 HIST1H2AAQ96QV6 131 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 WDR13Q9H1Z4 485 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 ERVK-18Q9QC07 812 aa10.36□□□□□ -0.75
RNF40-211ENST00000567365 TRAV20A0A0B4J274 112 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 PPIAL4CA0A0B4J2A2 164 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 PTGES3LE9PB15 166 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 J3QT63 122 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 PLPP2O43688 288 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 GATBO75879 557 aaKnown RBP10.35□□□□□ -0.75
RNF40-211ENST00000567365 MT-ND2P03891 347 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 CD1AP06126 327 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 MUC1P15941 1255 aaPredicted RBP10.35□□□□□ -0.75
RNF40-211ENST00000567365 WNT4P56705 351 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 MED21Q13503 144 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 ATPAF1Q5TC12 328 aaPredicted RBP10.35□□□□□ -0.75
RNF40-211ENST00000567365 SFRP4Q6FHJ7 346 aaPredicted RBP10.35□□□□□ -0.75
RNF40-211ENST00000567365 DEFB108BQ8NET1 73 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 TMEM186Q96B77 213 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 C12orf43Q96C57 262 aaKnown RBP10.35□□□□□ -0.75
RNF40-211ENST00000567365 SEH1LQ96EE3 360 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 CNBD2Q96M20 576 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 PKIBQ9C010 78 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 PLEKHA1Q9HB21 404 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 TRIM36Q9NQ86 728 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 YAE1D1Q9NRH1 226 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 CHCHD3Q9NX63 227 aaKnown RBP10.35□□□□□ -0.75
RNF40-211ENST00000567365 SCN3BQ9NY72 215 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 KAAG1Q9UBP8 84 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 CTSZQ9UBR2 303 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 MIOXQ9UGB7 285 aa10.35□□□□□ -0.75
RNF40-211ENST00000567365 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 TRBV5-5A0A0J9YX44 114 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 hCG_1807616A0A1W2PRN6 198 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 TRAPPC2LH3BP13 241 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 AKR7A2O43488 359 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 NDUFA2O43678 99 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 SYNGR1O43759 233 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 CRLF1O75462 422 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 PGA5P0DJD9 388 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 ATF1P18846 271 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 FUT6P51993 359 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 ERVK11-1P61568 191 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 BDH1Q02338 343 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 STUMQ69YW2 141 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 HAGHLQ6PII5 290 aaPredicted RBP10.34□□□□□ -0.75
RNF40-211ENST00000567365 KCTD8Q6ZWB6 473 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 RNF144BQ7Z419 303 aa10.34□□□□□ -0.75
RNF40-211ENST00000567365 ZNF573Q86YE8 665 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms