RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 A0A1W2PRD5 423 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 A0A1W2PRF3 423 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 A0A1W2PRM7 423 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 H0YAE9 185 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 GSC2O15499 205 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 MTRF1O75570 445 aaKnown RBP12.24□□□□□ -0.45
RNF40-209ENST00000566703 RHBDL1O75783 438 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 IGLV3-1P01715 115 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 KIR2DS4P43632 304 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 RPS7P62081 194 aaKnown RBP12.24□□□□□ -0.45
RNF40-209ENST00000566703 ROM1Q03395 351 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 C2orf68Q2NKX9 166 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 TRPM8Q7Z2W7 1104 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 THAP5Q7Z6K1 395 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 ZNRF1Q8ND25 227 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 OR5K1Q8NHB7 308 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 ASB17Q8WXJ9 295 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 AQP3Q92482 292 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 TEAD3Q99594 435 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 MROQ9BYG7 248 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 YY1AP1Q9H869 796 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 FAM206AQ9NX38 181 aa12.24□□□□□ -0.45
RNF40-209ENST00000566703 PKD1L1Q8TDX9 2849 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 A0A1W2PPH5 198 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 E2F6O75461 281 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 DLX1P56177 255 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 PRB3Q04118 309 aaPredicted RBP12.23□□□□□ -0.45
RNF40-209ENST00000566703 EGR3Q06889 387 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 LCN1P1Q5VSP4 162 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 HCP5Q6MZN7 132 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 MOB3CQ70IA8 216 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 ZNF679Q8IYX0 411 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 PNKDQ8N490 385 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 POC1AQ8NBT0 407 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 TMEM185AQ8NFB2 350 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 DNAJC9Q8WXX5 260 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 NRBF2Q96F24 287 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 SSX3Q99909 188 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 PBOV1Q9GZY1 135 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 PPA2Q9H2U2 334 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 HEXA-AS1Q9H8Q6 139 aa12.23□□□□□ -0.45
RNF40-209ENST00000566703 NOS1APO75052 506 aaPredicted RBP12.22□□□□□ -0.45
RNF40-209ENST00000566703 TSPAN15O95858 294 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 TFF1P04155 84 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 CSF1P09603 554 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 PRKACGP22612 351 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 GABRA5P31644 462 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 ACTR3P61158 418 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 APOFQ13790 326 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 HERPUD1Q15011 391 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 SNAPC1Q16533 368 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 CEP78Q5JTW2 689 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 HAGHLQ6PII5 290 aaPredicted RBP12.22□□□□□ -0.45
RNF40-209ENST00000566703 ACP7Q6ZNF0 438 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 ZNF561Q8N587 486 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 CCDC197Q8NCU1 140 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 BBS1Q8NFJ9 593 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 OR51G2Q8NGK0 314 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 CCDC124Q96CT7 223 aaKnown RBP12.22□□□□□ -0.45
RNF40-209ENST00000566703 OR8B4Q96RC9 309 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 THTPAQ9BU02 230 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 RANBP3Q9H6Z4 567 aaPredicted RBP12.22□□□□□ -0.45
RNF40-209ENST00000566703 RAB18Q9NP72 206 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 TVP23BQ9NYZ1 205 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 DNAJB9Q9UBS3 223 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 NUFIP1Q9UHK0 495 aaKnown RBP12.22□□□□□ -0.45
RNF40-209ENST00000566703 ENPP5Q9UJA9 477 aa12.22□□□□□ -0.45
RNF40-209ENST00000566703 hCG_1809904A0A1W2PP81 198 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 A0A1W2PPE2 198 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 A0A1W2PR64 198 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 A0A1W2PRV1 198 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 RFPL4AA6NLU0 287 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 RFPL4AL1F8VTS6 287 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 H3BUX3 64 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 DHRS3O75911 302 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 FAM107AO95990 144 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 NRASP01111 189 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 PRDX2P32119 198 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 RIDAP52758 137 aaKnown RBP12.21□□□□□ -0.45
RNF40-209ENST00000566703 HCCSP53701 268 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 SMIM21Q3B7S5 101 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 ZNF829Q3KNS6 432 aaPredicted RBP12.21□□□□□ -0.45
RNF40-209ENST00000566703 ZNF684Q5T5D7 378 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 TMEM236Q5W0B7 351 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 LIAT1Q6ZQX7 453 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 Q6ZTK2 550 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 ZNF573Q86YE8 665 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 CALHM1Q8IU99 346 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 FAM185AQ8N0U4 392 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 OR51E1Q8TCB6 317 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 AJUBAQ96IF1 538 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 CLPTM1LQ96KA5 538 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 MNTQ99583 582 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 GPR84Q9NQS5 396 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 POLDIP2Q9Y2S7 368 aa12.21□□□□□ -0.45
RNF40-209ENST00000566703 WNK1Q9H4A3 2382 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 PSMD9O00233 223 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 DLGAP1O14490 977 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 ANGPTL7O43827 346 aa12.2□□□□□ -0.46
RNF40-209ENST00000566703 EFNB2P52799 333 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms