RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TNFRSF1AP19438 455 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 MPZP25189 248 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 AZGP1P25311 298 aaKnown RBP6.87□□□□□ -1.31
CDH13-208ENST00000566333 GABRA5P31644 462 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 PDLIM4P50479 330 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 GNG3P63215 75 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 ZNF181Q2M3W8 571 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 SHEQ5VZ18 495 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 CD200R1LQ6Q8B3 271 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 CLEC2AQ6UVW9 174 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 UNQ9370/PRO34162Q6UXP9 181 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 SPNS3Q6ZMD2 512 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 CALHM1Q8IU99 346 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 GCSAMQ8N6F7 178 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 SCCPDHQ8NBX0 429 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 OR5A2Q8NGI9 324 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 TRMT10AQ8TBZ6 339 aaKnown RBP6.87□□□□□ -1.31
CDH13-208ENST00000566333 FAM168AQ92567 244 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 RPL3LQ92901 407 aaKnown RBP6.87□□□□□ -1.31
CDH13-208ENST00000566333 SPSB1Q96BD6 273 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 TECTBQ96PL2 329 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 BPESC1Q9GZL8 116 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 OR51I2Q9H344 312 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 ZCCHC4Q9H5U6 513 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 NOX4Q9NPH5 578 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 DLL4Q9NR61 685 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 C14orf119Q9NWQ9 140 aa6.87□□□□□ -1.31
CDH13-208ENST00000566333 MXRA5Q9NR99 2828 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 A0A1W2PPK0 400 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 A6NLC8 198 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 CLDN25C9JDP6 229 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 TMEM178BH3BS89 294 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 J3QT63 122 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 NDUFS8O00217 210 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 CCRL2O00421 344 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 GABRPO00591 440 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 CDIPTO14735 213 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 SYNGR1O43759 233 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 GPX5O75715 221 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 RGS9O75916 674 aaPredicted RBP6.86□□□□□ -1.31
CDH13-208ENST00000566333 ALX3O95076 343 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 CYB5R3P00387 301 aaPredicted RBP6.86□□□□□ -1.31
CDH13-208ENST00000566333 LHBP01229 141 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 IGHV2-70P01814 119 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 CD2P06729 351 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 GRPP07492 148 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 UCHL1P09936 223 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 JUNBP17275 347 aaPredicted RBP6.86□□□□□ -1.31
CDH13-208ENST00000566333 ADRA2CP18825 462 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 PSMA1P25786 263 aaKnown RBP6.86□□□□□ -1.31
CDH13-208ENST00000566333 CFHR2P36980 270 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 NR4A2P43354 598 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 ZP1P60852 638 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 FABP5Q01469 135 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 ZMYND11Q15326 602 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 CNN3Q15417 329 aaKnown RBP6.86□□□□□ -1.31
CDH13-208ENST00000566333 CARTPTQ16568 116 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 HFEQ30201 348 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 FAM201AQ5SY85 155 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 LYPD6Q86Y78 171 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 SERPINA12Q8IW75 414 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 MS4A15Q8N5U1 240 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 DNAAF1Q8NEP3 725 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 AQP3Q92482 292 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 CCL17Q92583 94 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 TMEM203Q969S6 136 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 ERGIC1Q969X5 290 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 RNF170Q96K19 258 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 SPACA5Q96QH8 159 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 NKX3-1Q99801 234 aaPredicted RBP6.86□□□□□ -1.31
CDH13-208ENST00000566333 PIMREGQ9BSJ6 248 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 METTL17Q9H7H0 456 aaPredicted RBP6.86□□□□□ -1.31
CDH13-208ENST00000566333 FN3KRPQ9HA64 309 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 C1orf123Q9NWV4 160 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 ITGB1BP2Q9UKP3 347 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 WIPI2Q9Y4P8 454 aa6.86□□□□□ -1.31
CDH13-208ENST00000566333 IGHV4-61A0A0C4DH41 118 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 IGKV1-12A0A0C4DH73 117 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 FAM230AA0A1W2PPH8 454 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 SHISA3A0PJX4 238 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 SRRM5B3KS81 715 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 IFNL4K9M1U5 179 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 ZNF205O95201 554 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 IGKV1D-12P01611 117 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 PGA5P0DJD9 388 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 SLC25A16P16260 332 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 RAB3AP20336 220 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 MAPK3P27361 379 aaPredicted RBP6.85□□□□□ -1.31
CDH13-208ENST00000566333 CD80P33681 288 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 HAAOP46952 286 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 FUT6P51993 359 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 DSCR9P59020 149 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 BTG1P62324 171 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 MZT1Q08AG7 82 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 TRAM1Q15629 374 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 ACSM3Q53FZ2 586 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 AVPI1Q5T686 147 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 HAGHLQ6PII5 290 aaPredicted RBP6.85□□□□□ -1.31
CDH13-208ENST00000566333 LHFPL2Q6ZUX7 228 aa6.85□□□□□ -1.31
CDH13-208ENST00000566333 LRRTM1Q86UE6 522 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms