RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PPA2Q9H2U2 334 aa6.99□□□□□ -1.29
CAPN3-213ENST00000565173 NIPAL2Q9H841 368 aa6.99□□□□□ -1.29
CAPN3-213ENST00000565173 ELL3Q9HB65 397 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-213ENST00000565173 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-213ENST00000565173 SIGLEC9Q9Y336 463 aa6.99□□□□□ -1.29
CAPN3-213ENST00000565173 SF3B6Q9Y3B4 125 aaKnown RBP6.99□□□□□ -1.29
CAPN3-213ENST00000565173 LRP12Q9Y561 859 aa6.99□□□□□ -1.29
CAPN3-213ENST00000565173 TRBV23-1A0A0A0MS06 115 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 A0A0U1RQV5 110 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 A0A1W2PQ09 198 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 ACOD1A6NK06 481 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 ZNF732B4DXR9 585 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 PSMD9O00233 223 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 GSC2O15499 205 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 PRODHO43272 600 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 MTRF1O75570 445 aaKnown RBP6.98□□□□□ -1.29
CAPN3-213ENST00000565173 PAHP00439 452 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 CST1P01037 141 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 HMGN1P05114 100 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 OSMP13725 252 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 GLRA1P23415 457 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 PAX6P26367 422 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 POU1F1P28069 291 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 KIR2DS4P43632 304 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 MAP2K3P46734 347 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 GABRA2P47869 451 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 EFNB2P52799 333 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 C2orf68Q2NKX9 166 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 CEP78Q5JTW2 689 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 SLC35D3Q5M8T2 416 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 TMEM236Q5W0B7 351 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 HIST2H2BDQ6DRA6 164 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 OR5A2Q8NGI9 324 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 OR5D13Q8NGL4 314 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 ZNF671Q8TAW3 534 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 CANT1Q8WVQ1 401 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 AQP3Q92482 292 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 CFHR4Q92496 578 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 RORBQ92753 470 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 PPP1R14AQ96A00 147 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 ASB9Q96DX5 294 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 LRGUKQ96M69 825 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 HIST1H2AAQ96QV6 131 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 SSX3Q99909 188 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 CADM1Q9BY67 442 aaKnown RBP6.98□□□□□ -1.29
CAPN3-213ENST00000565173 YY1AP1Q9H869 796 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 C19orf12Q9NSK7 152 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 LAMP5Q9UJQ1 280 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 FOXJ3Q9UPW0 622 aa6.98□□□□□ -1.29
CAPN3-213ENST00000565173 TMEM269A0A1B0GVZ9 245 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 CCDC182A6NF36 153 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 ANKRD61A6NGH8 418 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 RFPL4AA6NLU0 287 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 RFPL4AL1F8VTS6 287 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 G3V4G9 280 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 H0YAE9 185 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 H3BUX3 64 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 SRSF10O75494 262 aaKnown RBP6.97□□□□□ -1.29
CAPN3-213ENST00000565173 CSF1P09603 554 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 ATP6V1B1P15313 513 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 PRKACGP22612 351 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 GABRA5P31644 462 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 ERVFRD-1P60508 538 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 ROM1Q03395 351 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 RIPPLY1Q0D2K3 151 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 APOFQ13790 326 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 BLMHQ13867 455 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 AANATQ16613 207 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 TMEM200BQ69YZ2 307 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 HAGHLQ6PII5 290 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-213ENST00000565173 DEGS2Q6QHC5 323 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 ACP7Q6ZNF0 438 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 MOB3CQ70IA8 216 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 THAP5Q7Z6K1 395 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 MKXQ8IYA7 352 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 CD177Q8N6Q3 437 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 PAPD5Q8NDF8 572 aaKnown RBP6.97□□□□□ -1.29
CAPN3-213ENST00000565173 OR5K1Q8NHB7 308 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 OR51E1Q8TCB6 317 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 ITFG2Q969R8 447 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 ZNF488Q96MN9 340 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 TEAD3Q99594 435 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 YIPF3Q9GZM5 350 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 PBOV1Q9GZY1 135 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 GPR84Q9NQS5 396 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 RASL12Q9NYN1 266 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 COPS3Q9UNS2 423 aa6.97□□□□□ -1.29
CAPN3-213ENST00000565173 FAM90A8PA6NJQ4 464 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 OR5B21A6NL26 309 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 SYNGR1O43759 233 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 ANGPTL7O43827 346 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 CHST1O43916 411 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 NOS1APO75052 506 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-213ENST00000565173 OPN1MWP04001 364 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 PGA5P0DJD9 388 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 OPN1MW2P0DN77 364 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 OPN1MW3P0DN78 364 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 FAHP16930 419 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 PRDX2P32119 198 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 RPL31P62899 125 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms