RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 C19orf12Q9NSK7 152 aa2.96□□□□□ -1.94
CHD9-212ENST00000564641 IMP3Q9NV31 184 aaKnown RBP2.96□□□□□ -1.94
CHD9-212ENST00000564641 ELOVL2Q9NXB9 296 aa2.96□□□□□ -1.94
CHD9-212ENST00000564641 PDP1Q9P0J1 537 aaPredicted RBP2.96□□□□□ -1.94
CHD9-212ENST00000564641 COX16Q9P0S2 106 aa2.96□□□□□ -1.94
CHD9-212ENST00000564641 SEC14L3Q9UDX4 400 aa2.96□□□□□ -1.94
CHD9-212ENST00000564641 KLHDC2Q9Y2U9 406 aa2.96□□□□□ -1.94
CHD9-212ENST00000564641 POLR3HQ9Y535 204 aaPredicted RBP2.96□□□□□ -1.94
CHD9-212ENST00000564641 NUBP2Q9Y5Y2 271 aa2.96□□□□□ -1.94
CHD9-212ENST00000564641 FLNBO75369 2602 aaKnown RBP2.96□□□□□ -1.94
CHD9-212ENST00000564641 MYO16Q9Y6X6 1858 aa2.96□□□□□ -1.94
CHD9-212ENST00000564641 KIAA1549LQ6ZVL6 1849 aa2.96□□□□□ -1.94
CHD9-212ENST00000564641 COL6A6A6NMZ7 2263 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 FRYQ5TBA9 3013 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 A0A096LPI6 279 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 A0A0A6YYD4 124 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 C7orf66A4D0T2 115 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 TRAPPC13A5PLN9 417 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 FOXI3A8MTJ6 420 aaPredicted RBP2.95□□□□□ -1.94
CHD9-212ENST00000564641 WASH3PC4AMC7 463 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 DISC1C4P0D8 188 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ZNF670-ZNF695F2Z2N8 137 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 FXYD1O00168 92 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 AZIN1O14977 448 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 CASC3O15234 703 aaKnown RBP2.95□□□□□ -1.94
CHD9-212ENST00000564641 SLC19A2O60779 497 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 SDC3O75056 442 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ZNF253O75346 499 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 RP2O75695 350 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 RBBP9O75884 186 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ANXA9O76027 345 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 TOXO94900 526 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 OR4F21O95013 312 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 RAB3DO95716 219 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 LGI1O95970 557 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 PTHP01270 115 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 IFNGP01579 166 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 IGLV3-19P01714 112 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 HLA-DQB1P01920 261 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 MBP02144 154 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ALDOBP05062 364 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 CRYBA1P05813 215 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 GP1BAP07359 652 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 FGF4P08620 206 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 NMBP08949 121 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 SLC35G4P0C7Q5 338 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 SULT1A3P0DMM9 295 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 SULT1A4P0DMN0 295 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 COX5BP10606 129 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 CLUP10909 449 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 CBR1P16152 277 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 IL1RNP18510 177 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 DRD5P21918 477 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 BCKDHBP21953 392 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 CRABP1P29762 137 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 GGT2P36268 569 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 CDKN2CP42773 168 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 SGSHP51688 502 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 VSX2P58304 361 aaPredicted RBP2.95□□□□□ -1.94
CHD9-212ENST00000564641 ERVPABLB-1P60509 514 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 RPL27P61353 136 aaKnown RBP2.95□□□□□ -1.94
CHD9-212ENST00000564641 TNFRSF17Q02223 184 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 MXD1Q05195 221 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ST3GAL4Q11206 333 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ECH1Q13011 328 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 BIKQ13323 160 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 SNTB2Q13425 540 aaKnown RBP2.95□□□□□ -1.94
CHD9-212ENST00000564641 GPR176Q14439 515 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 GUCA2BQ16661 112 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 CDKN3Q16667 212 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 EXOC3L2Q2M3D2 409 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 SLC22A6Q4U2R8 563 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 AKIRIN2Q53H80 203 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 PYCR3Q53H96 274 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ACER2Q5QJU3 275 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 SAPCD1Q5SSQ6 148 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 BCL2L15Q5TBC7 163 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 SDHAF4Q5VUM1 108 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 HACD4Q5VWC8 232 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 NCR3LG1Q68D85 454 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 CLEC6AQ6EIG7 209 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 OR2T5Q6IEZ7 315 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 FRMPD2BQ6IN97 320 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ENPP6Q6UWR7 440 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 IGFL3Q6UXB1 125 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 LRRN1Q6UXK5 716 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ZNF730Q6ZMV8 503 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 PID1Q7Z2X4 250 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 NUFIP2Q7Z417 695 aaKnown RBP2.95□□□□□ -1.94
CHD9-212ENST00000564641 ACOT1Q86TX2 421 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 TAC4Q86UU9 113 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 COMTD1Q86VU5 262 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ZFP82Q8N141 532 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 SVBPQ8N300 66 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 ARRDC1Q8N5I2 433 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 PQLC3Q8N755 202 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 CLDN22Q8N7P3 220 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 NFAM1Q8NET5 270 aaPredicted RBP2.95□□□□□ -1.94
CHD9-212ENST00000564641 OR11H7Q8NGC8 314 aa2.95□□□□□ -1.94
CHD9-212ENST00000564641 OR8J3Q8NGG0 315 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms