RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 OR52D1Q9H346 318 aa5.85□□□□□ -1.47
VPS4A-203ENST00000564399 ABCB9Q9NP78 766 aa5.85□□□□□ -1.47
VPS4A-203ENST00000564399 DNAJC27Q9NZQ0 273 aa5.85□□□□□ -1.47
VPS4A-203ENST00000564399 ZNF222Q9UK12 451 aa5.85□□□□□ -1.47
VPS4A-203ENST00000564399 ENPP4Q9Y6X5 453 aa5.85□□□□□ -1.47
VPS4A-203ENST00000564399 MEX3AA1L020 520 aaKnown RBP5.84□□□□□ -1.47
VPS4A-203ENST00000564399 RFPL4AA6NLU0 287 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 ODF3BA8MYP8 253 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 RFPL4AL1F8VTS6 287 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 ZNF593O00488 134 aaPredicted RBP5.84□□□□□ -1.47
VPS4A-203ENST00000564399 SLC22A2O15244 555 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 IDH3BO43837 385 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 NPPAP01160 153 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 APOC1P02654 83 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 PSKH1P11801 424 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 FMO3P31513 532 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 MYCNOSP40205 109 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 ENTPD1P49961 510 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 GPM6AP51674 278 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 CBX1P83916 185 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 EIF2B1Q14232 305 aaKnown RBP5.84□□□□□ -1.47
VPS4A-203ENST00000564399 SEC23BQ15437 767 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 KLHL12Q53G59 568 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 FAM76BQ5HYJ3 339 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 LDLRAD2Q5SZI1 272 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 ZNF626Q68DY1 528 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 ZFAND6Q6FIF0 208 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 ZNF770Q6IQ21 691 aaPredicted RBP5.84□□□□□ -1.47
VPS4A-203ENST00000564399 CBLL1Q75N03 491 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 C16orf82Q7Z2V1 217 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 CALHM1Q8IU99 346 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 ZDHHC23Q8IYP9 409 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 LINC00471Q8N535 108 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 ZNF511Q8NB15 262 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 OR2T4Q8NH00 348 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 BCAS4Q8TDM0 211 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 DYDC1Q8WWB3 177 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 STMN2Q93045 179 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 PGAM5Q96HS1 289 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 RCHY1Q96PM5 261 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 GID8Q9NWU2 228 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 COMMD3-BMI1R4GMX3 469 aa5.84□□□□□ -1.47
VPS4A-203ENST00000564399 DHRS12A0PJE2 317 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 PSMB11A5LHX3 300 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 SH2D7A6NKC9 451 aaPredicted RBP5.83□□□□□ -1.48
VPS4A-203ENST00000564399 C17orf98A8MV24 154 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 FAM90A22PA8MWA6 464 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 ZNF732B4DXR9 585 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 CXCR6O00574 342 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 MTRF1O75570 445 aaKnown RBP5.83□□□□□ -1.48
VPS4A-203ENST00000564399 SERPINA1P01009 418 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 CST4P01036 141 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 ZNF728P0DKX0 622 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 CD24P25063 80 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 ACKR3P25106 362 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 PRDX2P32119 198 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 DCTDP32321 178 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 ECI1P42126 302 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 GP2P55259 537 aaKnown RBP5.83□□□□□ -1.48
VPS4A-203ENST00000564399 ZNF121P58317 390 aaPredicted RBP5.83□□□□□ -1.48
VPS4A-203ENST00000564399 RPL23AP62750 156 aaKnown RBP5.83□□□□□ -1.48
VPS4A-203ENST00000564399 IL18R1Q13478 541 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 KRT72Q14CN4 511 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 SMIM21Q3B7S5 101 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 LCN8Q6JVE9 175 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 HAGHLQ6PII5 290 aaPredicted RBP5.83□□□□□ -1.48
VPS4A-203ENST00000564399 ACP7Q6ZNF0 438 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 C8orf86Q6ZUL3 223 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 ZNF329Q86UD4 541 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 OSR2Q8N2R0 312 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 ZNF561Q8N587 486 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 CD177Q8N6Q3 437 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 FAM86B1Q8N7N1 296 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 KLHL30-AS1Q8NEE0 82 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 OR11H6Q8NGC7 330 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 ZNRF4Q8WWF5 429 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 HPSE2Q8WWQ2 592 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 TLCD1Q96CP7 247 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 SLC25A33Q9BSK2 321 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 FGF23Q9GZV9 251 aaPredicted RBP5.83□□□□□ -1.48
VPS4A-203ENST00000564399 RGCCQ9H4X1 137 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 LIN7BQ9HAP6 207 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 TMBIM4Q9HC24 238 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 RASL12Q9NYN1 266 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 ZNF319Q9P2F9 582 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 GMPR2Q9P2T1 348 aaKnown RBP5.83□□□□□ -1.48
VPS4A-203ENST00000564399 OR14J1Q9UGF5 321 aa5.83□□□□□ -1.48
VPS4A-203ENST00000564399 DYNC2H1Q8NCM8 4307 aaKnown RBP5.83□□□□□ -1.48
VPS4A-203ENST00000564399 A0A0G2JND7 137 aa5.82□□□□□ -1.48
VPS4A-203ENST00000564399 BBIP1A8MTZ0 92 aa5.82□□□□□ -1.48
VPS4A-203ENST00000564399 DIRAS1O95057 198 aa5.82□□□□□ -1.48
VPS4A-203ENST00000564399 LY86O95711 162 aa5.82□□□□□ -1.48
VPS4A-203ENST00000564399 PGA5P0DJD9 388 aa5.82□□□□□ -1.48
VPS4A-203ENST00000564399 IGHV1-8P0DP01 117 aa5.82□□□□□ -1.48
VPS4A-203ENST00000564399 RHCEP18577 417 aa5.82□□□□□ -1.48
VPS4A-203ENST00000564399 CHATP28329 748 aa5.82□□□□□ -1.48
VPS4A-203ENST00000564399 BRS3P32247 399 aa5.82□□□□□ -1.48
VPS4A-203ENST00000564399 LUMP51884 338 aaPredicted RBP5.82□□□□□ -1.48
VPS4A-203ENST00000564399 DLX6P56179 175 aa5.82□□□□□ -1.48
VPS4A-203ENST00000564399 EDDM3BP56851 147 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms