RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TESK1Q15569 626 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 PCGF3Q3KNV8 242 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 TMEM255AQ5JRV8 349 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 UBE2NLQ5JXB2 153 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 AGAP6Q5VW22 663 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 FAM166AQ6J272 317 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 GLIPR1L1Q6UWM5 242 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 CELF2-AS1Q8N7Q2 184 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 ZNF611Q8N823 705 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 ZSCAN4Q8NAM6 433 aaPredicted RBP10.92□□□□□ -0.66
CLK3-214ENST00000564096 OR5D18Q8NGL1 313 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 NEUROG1Q92886 237 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 RFT1Q96AA3 541 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 FAM3DQ96BQ1 224 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 CMTM3Q96MX0 182 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 EGLN1Q9GZT9 426 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 METTL9Q9H1A3 318 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 MS4A5Q9H3V2 200 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 ELL3Q9HB65 397 aaPredicted RBP10.92□□□□□ -0.66
CLK3-214ENST00000564096 COMMD3Q9UBI1 195 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 SPATA2Q9UM82 520 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 GCN1Q92616 2671 aaKnown RBP10.92□□□□□ -0.66
CLK3-214ENST00000564096 A6NLC8 198 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 SPRY3O43610 288 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 SCGNO76038 276 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 KDM4BO94953 1096 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 PLATP00750 562 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 ADH4P08319 380 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 CD37P11049 281 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
CLK3-214ENST00000564096 TNFRSF1AP19438 455 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 THBS2P35442 1172 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 PPOXP50336 477 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 BMXP51813 675 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 CLDN12P56749 244 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 ZP1P60852 638 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 TNFAIP6P98066 277 aaPredicted RBP10.91□□□□□ -0.66
CLK3-214ENST00000564096 RSU1Q15404 277 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 DMRTC1Q5HYR2 192 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 FAM209AQ5JX71 171 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 HAGHLQ6PII5 290 aaPredicted RBP10.91□□□□□ -0.66
CLK3-214ENST00000564096 Q6ZR03 302 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 OR2W3Q7Z3T1 314 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 ANGPTL5Q86XS5 388 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 LYPD6Q86Y78 171 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 MKXQ8IYA7 352 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 Q8IYB0 196 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 SAXO1Q8IYX7 474 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 SAMD12Q8N8I0 201 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 PXT1Q8NFP0 134 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 OR4D6Q8NGJ1 314 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 CBLN4Q9NTU7 201 aa10.91□□□□□ -0.66
CLK3-214ENST00000564096 RELNP78509 3460 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 IGKV1-27A0A075B6S5 117 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 C17orf100A8MU93 164 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 F5H5P2 479 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 TPD52L2O43399 206 aaKnown RBP10.9□□□□□ -0.66
CLK3-214ENST00000564096 CLDN1O95832 211 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 IGHV1-46P01743 117 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 CSTBP04080 98 aaKnown RBP10.9□□□□□ -0.66
CLK3-214ENST00000564096 CD55P08174 381 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 NAT2P11245 290 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 RAB6AP20340 208 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 MPZP25189 248 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 TLE4Q04727 773 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 IL24Q13007 206 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 ZNF154Q13106 437 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 PDZK1IP1Q13113 114 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 SLC25A26Q70HW3 274 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 LRRC28Q86X40 367 aaPredicted RBP10.9□□□□□ -0.66
CLK3-214ENST00000564096 OR51D1Q8NGF3 324 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 LILRB1Q8NHL6 650 aaPredicted RBP10.9□□□□□ -0.66
CLK3-214ENST00000564096 KCNG3Q8TAE7 436 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 ERGIC1Q969X5 290 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 PTX4Q96A99 478 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 PHF21AQ96BD5 680 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 WDFY2Q96P53 400 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 OR2V2Q96R30 315 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 TSC22D3Q99576 134 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 OR51I2Q9H344 312 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 PPP1R3EQ9H7J1 279 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 FN3KRPQ9HA64 309 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 UBTD1Q9HAC8 227 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 RHOFQ9HBH0 211 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 DECR2Q9NUI1 292 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 IL36GQ9NZH8 169 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 FBLN5Q9UBX5 448 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 IL19Q9UHD0 177 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 ING4Q9UNL4 249 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 BOLA1Q9Y3E2 137 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 PMF1-BGLAPU3KQ54 211 aa10.9□□□□□ -0.66
CLK3-214ENST00000564096 UBR5O95071 2799 aaPredicted RBP10.9□□□□□ -0.66
CLK3-214ENST00000564096 A0A0B4J203 849 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 hCG_1807616A0A1W2PRN6 198 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 METTL21EPA6NDL7 271 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 FAM25AB3EWG3 89 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 FAM25CB3EWG5 89 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 FAM25GB3EWG6 89 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 H0YL77 283 aa10.89□□□□□ -0.67
CLK3-214ENST00000564096 TRAPPC2LH3BP13 241 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms