RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 ZNF48Q96MX3 618 aaPredicted RBP19.72■□□□□ 0.75
CDR2-202ENST00000561630 SNTG1Q9NSN8 517 aa19.72■□□□□ 0.75
CDR2-202ENST00000561630 RPUSD1Q9UJJ7 312 aaKnown RBP19.72■□□□□ 0.75
CDR2-202ENST00000561630 GMPPBQ9Y5P6 360 aa19.72■□□□□ 0.75
CDR2-202ENST00000561630 GPR37O15354 613 aa19.71■□□□□ 0.75
CDR2-202ENST00000561630 MMP9P14780 707 aa19.71■□□□□ 0.75
CDR2-202ENST00000561630 HAGHLQ6PII5 290 aaPredicted RBP19.71■□□□□ 0.75
CDR2-202ENST00000561630 FGFRL1Q8N441 504 aa19.71■□□□□ 0.75
CDR2-202ENST00000561630 ANGPTL6Q8NI99 470 aa19.71■□□□□ 0.75
CDR2-202ENST00000561630 PCGF1Q9BSM1 259 aa19.71■□□□□ 0.75
CDR2-202ENST00000561630 NLKQ9UBE8 527 aa19.71■□□□□ 0.75
CDR2-202ENST00000561630 DOCK11Q5JSL3 2073 aa19.71■□□□□ 0.75
CDR2-202ENST00000561630 NDUFB3O43676 98 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 TOX4O94842 621 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 SFTPBP07988 381 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 GLRA1P23415 457 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 BPIFB3P59826 476 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 UBA52P62987 128 aaKnown RBP19.7■□□□□ 0.74
CDR2-202ENST00000561630 ACTC1P68032 377 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 ACTA1P68133 377 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 IKZF1Q13422 519 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 ODF4Q2M2E3 257 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 ZNF788Q6ZQV5 615 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 FAM220AQ7Z4H9 259 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 PRSS35Q8N3Z0 413 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 WDFY2Q96P53 400 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 TBX15Q96SF7 602 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 GPR173Q9NS66 373 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 ACOXLQ9NUZ1 547 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 GNG8Q9UK08 70 aa19.7■□□□□ 0.74
CDR2-202ENST00000561630 A0A1B0GVI7 797 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 A6NIN4 97 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 NKX6-3A6NJ46 265 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 SNTNA6NMZ2 147 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 OR2AT4A6NND4 320 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 SYT7O43581 403 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 GABRB1P18505 474 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 TP53I3Q53FA7 332 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 LRRC10Q5BKY1 277 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 GPR157Q5UAW9 335 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 METTL11BQ5VVY1 283 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 KCTD20Q7Z5Y7 419 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 ZNF573Q86YE8 665 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 LY6G5BQ8NDX9 201 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 RNF166Q96A37 237 aaPredicted RBP19.69■□□□□ 0.74
CDR2-202ENST00000561630 MED30Q96HR3 178 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 DMRTB1Q96MA1 342 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 GAFA1Q96PS6 74 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 SIRPDQ9H106 197 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 CNTD2Q9H8S5 307 aa19.69■□□□□ 0.74
CDR2-202ENST00000561630 SOX21Q9Y651 276 aaPredicted RBP19.69■□□□□ 0.74
CDR2-202ENST00000561630 PQLC2LA1A4F0 135 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 SIGLEC5O15389 551 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 ARF6P62330 175 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 ACTG1P63261 375 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 IL13RA1P78552 427 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 CDONQ4KMG0 1287 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 ENTHD1Q8IYW4 607 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 CCDC54Q8NEL0 328 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 RHOXF1Q8NHV9 184 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 TMIGD2Q96BF3 282 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 RASL12Q9NYN1 266 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.68■□□□□ 0.74
CDR2-202ENST00000561630 AASSQ9UDR5 926 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 EXOGQ9Y2C4 368 aaKnown RBP19.68■□□□□ 0.74
CDR2-202ENST00000561630 PCDHGB1Q9Y5G3 927 aa19.68■□□□□ 0.74
CDR2-202ENST00000561630 IGKV1D-17A0A075B6S4 117 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 DAPL1A0PJW8 107 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 ANKRD61A6NGH8 418 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 J3QT63 122 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 MPZL2O60487 215 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 TFF1P04155 84 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 ACAA1P09110 424 aaPredicted RBP19.67■□□□□ 0.74
CDR2-202ENST00000561630 SELLP14151 372 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 HAAOP46952 286 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 BAMBIQ13145 260 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 DGUOKQ16854 277 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 BRD3OSQ6XYD6 125 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 POC1AQ8NBT0 407 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 LGALS12Q96DT0 336 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 C1orf147Q96MC9 270 aaPredicted RBP19.67■□□□□ 0.74
CDR2-202ENST00000561630 ADI1Q9BV57 179 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 PLEKHA1Q9HB21 404 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 FAM118AQ9NWS6 357 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 ZNF222Q9UK12 451 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 KPTNQ9Y664 436 aa19.67■□□□□ 0.74
CDR2-202ENST00000561630 LOC100130705A0A1B0GUX0 176 aa19.66■□□□□ 0.74
CDR2-202ENST00000561630 TMEM89A2RUT3 159 aa19.66■□□□□ 0.74
CDR2-202ENST00000561630 DNAJC9-AS1A6NH13 148 aa19.66■□□□□ 0.74
CDR2-202ENST00000561630 SLC16A6O15403 523 aa19.66■□□□□ 0.74
CDR2-202ENST00000561630 SYNGR1O43759 233 aa19.66■□□□□ 0.74
CDR2-202ENST00000561630 NOS1APO75052 506 aaPredicted RBP19.66■□□□□ 0.74
CDR2-202ENST00000561630 BAG2O95816 211 aa19.66■□□□□ 0.74
CDR2-202ENST00000561630 UBCP0CG48 685 aaKnown RBP19.66■□□□□ 0.74
CDR2-202ENST00000561630 PSG2P11465 335 aa19.66■□□□□ 0.74
CDR2-202ENST00000561630 PRTN3P24158 256 aa19.66■□□□□ 0.74
CDR2-202ENST00000561630 KIR3DL2P43630 455 aa19.66■□□□□ 0.74
CDR2-202ENST00000561630 COMPP49747 757 aaPredicted RBP19.66■□□□□ 0.74
CDR2-202ENST00000561630 PDCD1Q15116 288 aa19.66■□□□□ 0.74
CDR2-202ENST00000561630 ACBD7Q8N6N7 88 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms