RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TMIGD2Q96BF3 282 aa8.45□□□□□ -1.06
HERC1-212ENST00000561348 C1orf159Q96HA4 380 aa8.45□□□□□ -1.06
HERC1-212ENST00000561348 RNPEPL1Q9HAU8 725 aa8.45□□□□□ -1.06
HERC1-212ENST00000561348 TRIM36Q9NQ86 728 aa8.45□□□□□ -1.06
HERC1-212ENST00000561348 TMEM160Q9NX00 188 aa8.45□□□□□ -1.06
HERC1-212ENST00000561348 OR14J1Q9UGF5 321 aa8.45□□□□□ -1.06
HERC1-212ENST00000561348 LRCH1Q9Y2L9 728 aa8.45□□□□□ -1.06
HERC1-212ENST00000561348 AUP1Q9Y679 476 aa8.45□□□□□ -1.06
HERC1-212ENST00000561348 V9GYS6 101 aa8.45□□□□□ -1.06
HERC1-212ENST00000561348 DOCK11Q5JSL3 2073 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 TRBV2A0A0J9YWF9 115 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 PNMA8CA0A1B0GUJ8 204 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 A0A1B0GW55 424 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 NKX6-3A6NJ46 265 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 E9PI62 339 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 E9PQ18 207 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 J3QRE1 110 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 CASQ2O14958 399 aaPredicted RBP8.44□□□□□ -1.06
HERC1-212ENST00000561348 SYNGR1O43759 233 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 XPNPEP2O43895 674 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 PTBP3O95758 552 aaKnown RBP8.44□□□□□ -1.06
HERC1-212ENST00000561348 DUX4L2P0CJ85 424 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 DUX4L3P0CJ86 424 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 DUX4L4P0CJ87 422 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 DUX4L5P0CJ88 424 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 DUX4L6P0CJ89 424 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 DUX4L7P0CJ90 424 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 NDUFB7P17568 137 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 SOX2P48431 317 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 POU3F4P49335 361 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 ETV1P50549 477 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 GTF2A1P52655 376 aaPredicted RBP8.44□□□□□ -1.06
HERC1-212ENST00000561348 SNU13P55769 128 aaKnown RBP8.44□□□□□ -1.06
HERC1-212ENST00000561348 ADARB1P78563 741 aaKnown RBP8.44□□□□□ -1.06
HERC1-212ENST00000561348 ZBTB37Q5TC79 503 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 OR2G6Q5TZ20 316 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 WDR25Q64LD2 544 aaPredicted RBP8.44□□□□□ -1.06
HERC1-212ENST00000561348 DUX4L9Q6RFH8 374 aaPredicted RBP8.44□□□□□ -1.06
HERC1-212ENST00000561348 TMPRSS11AQ6ZMR5 421 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 AHSA2Q719I0 299 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 SLC36A1Q7Z2H8 476 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 ZNF573Q86YE8 665 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 FGFRL1Q8N441 504 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 STX19Q8N4C7 294 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 FAM216BQ8N7L0 139 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 OR10AC1Q8NH08 325 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 NANPQ8TBE9 248 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 GATAD2BQ8WXI9 593 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 RFT1Q96AA3 541 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 PELI1Q96FA3 418 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 BORCS8Q96FH0 119 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 TMEM80Q96HE8 168 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 NUDT16L1Q9BRJ7 211 aaKnown RBP8.44□□□□□ -1.06
HERC1-212ENST00000561348 TMPRSS13Q9BYE2 586 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 COMMD4Q9H0A8 199 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 OR51I2Q9H344 312 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 NEK6Q9HC98 313 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 CTSZQ9UBR2 303 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 DUX4Q9UBX2 424 aa8.44□□□□□ -1.06
HERC1-212ENST00000561348 IRGMA1A4Y4 181 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 PTGES3LE9PB15 166 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 F5H0A9 414 aaPredicted RBP8.43□□□□□ -1.06
HERC1-212ENST00000561348 H0YAE9 185 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 J3QLI3 93 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 DVL1O14640 695 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 NDUFB3O43676 98 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 NDUFA2O43678 99 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 GATBO75879 557 aaKnown RBP8.43□□□□□ -1.06
HERC1-212ENST00000561348 NXPH2O95156 264 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 LHBP01229 141 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 IGLV3-1P01715 115 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 IGHA1P01876 353 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 CALCBP10092 127 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 MUC1P15941 1255 aaPredicted RBP8.43□□□□□ -1.06
HERC1-212ENST00000561348 ZNF12P17014 697 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 DCKP27707 260 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 AQP4P55087 323 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 ISL1P61371 349 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 ST3GAL4Q11206 333 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 IL18R1Q13478 541 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 MED21Q13503 144 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 CNN3Q15417 329 aaKnown RBP8.43□□□□□ -1.06
HERC1-212ENST00000561348 C1orf229Q6ZS94 237 aaPredicted RBP8.43□□□□□ -1.06
HERC1-212ENST00000561348 BPIFB2Q8N4F0 458 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 ZFP41Q8N8Y5 198 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 TMEM185AQ8NFB2 350 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 OR51A4Q8NGJ6 313 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 OR5AK2Q8NH90 309 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 NRG4Q8WWG1 115 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 RAB40AQ8WXH6 277 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 ADAT3Q96EY9 351 aaPredicted RBP8.43□□□□□ -1.06
HERC1-212ENST00000561348 SPACA5Q96QH8 159 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 PDCD1LG2Q9BQ51 273 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 PCGF1Q9BSM1 259 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 VCX3BQ9H321 246 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 SMURF1Q9HCE7 757 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 INPP5EQ9NRR6 644 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 ONECUT1Q9UBC0 465 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 NLKQ9UBE8 527 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 CLEC2DQ9UHP7 191 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms