RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 OR52A1Q9UKL2 312 aa12.16□□□□□ -0.46
IDH3A-219ENST00000560414 SLC22A13Q9Y226 551 aa12.16□□□□□ -0.46
IDH3A-219ENST00000560414 TMEM89A2RUT3 159 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 DNAJC9-AS1A6NH13 148 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 A6NIN4 97 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 F8W735 103 aaPredicted RBP12.15□□□□□ -0.46
IDH3A-219ENST00000560414 P2RY10O00398 339 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 EI24O14681 340 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 DHRS3O75911 302 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 TOX4O94842 621 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 ALPLP05186 524 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 LIPFP07098 398 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 SELLP14151 372 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 MMP9P14780 707 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 ATP6V1B1P15313 513 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 ARF6P62330 175 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 GNG3P63215 75 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 EGR3Q06889 387 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 IKZF1Q13422 519 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 ZIK1Q3SY52 487 aaPredicted RBP12.15□□□□□ -0.46
IDH3A-219ENST00000560414 BCL2L15Q5TBC7 163 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 PLCXD3Q63HM9 321 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 RUSC1-AS1Q66K80 236 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 STUMQ69YW2 141 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 C9orf139Q6ZV77 190 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 SLC36A1Q7Z2H8 476 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 ELMOD2Q8IZ81 293 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 YIPF7Q8N8F6 280 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 PNLDC1Q8NA58 520 aaKnown RBP12.15□□□□□ -0.46
IDH3A-219ENST00000560414 OR10H4Q8NGA5 316 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 C12orf43Q96C57 262 aaKnown RBP12.15□□□□□ -0.46
IDH3A-219ENST00000560414 RAB3IPQ96QF0 476 aaPredicted RBP12.15□□□□□ -0.46
IDH3A-219ENST00000560414 TBX15Q96SF7 602 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 ENPP5Q9UJA9 477 aa12.15□□□□□ -0.46
IDH3A-219ENST00000560414 TENM1Q9UKZ4 2725 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 A0A1B0GTI1 187 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 MEGF11A6BM72 1044 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 H3BSH0 61 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 OR2T7P0C7T2 308 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 PRTN3P24158 256 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 ATP6V1E1P36543 226 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 MTNR1AP48039 350 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 TGM4P49221 684 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 CDC42P60953 191 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 ODF4Q2M2E3 257 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 ATPAF1Q5TC12 328 aaPredicted RBP12.14□□□□□ -0.47
IDH3A-219ENST00000560414 GPR157Q5UAW9 335 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 OR5A2Q8NGI9 324 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 OR14K1Q8NGZ2 314 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 OR2T27Q8NH04 317 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 WDFY2Q96P53 400 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 SIRPDQ9H106 197 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 MOB1AQ9H8S9 216 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 GPR173Q9NS66 373 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 RPUSD1Q9UJJ7 312 aaKnown RBP12.14□□□□□ -0.47
IDH3A-219ENST00000560414 SNX5Q9Y5X3 404 aa12.14□□□□□ -0.47
IDH3A-219ENST00000560414 CENPVL3A0A0U1RRI6 287 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 METTL15A6NJ78 407 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 NDUFB3O43676 98 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 MTRF1O75570 445 aaKnown RBP12.13□□□□□ -0.47
IDH3A-219ENST00000560414 ECDO95905 644 aaPredicted RBP12.13□□□□□ -0.47
IDH3A-219ENST00000560414 NRASP01111 189 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 KRT8P05787 483 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 GLRA1P23415 457 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 CFPP27918 469 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 SLC9A3R2Q15599 337 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 DEFB112Q30KQ8 113 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 ZNF684Q5T5D7 378 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 ZBTB37Q5TC79 503 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 METTL11BQ5VVY1 283 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 ZFP1Q6P2D0 407 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 HAGHLQ6PII5 290 aaPredicted RBP12.13□□□□□ -0.47
IDH3A-219ENST00000560414 CBR4Q8N4T8 237 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 ANGPTL6Q8NI99 470 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 AQP3Q92482 292 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 RORBQ92753 470 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 TAF15Q92804 592 aaKnown RBP eCLIP12.13□□□□□ -0.47
IDH3A-219ENST00000560414 ITFG2Q969R8 447 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 GAFA1Q96PS6 74 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 CNTD2Q9H8S5 307 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 IMPAD1Q9NX62 359 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 USE1Q9NZ43 259 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 AASSQ9UDR5 926 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 ORC6Q9Y5N6 252 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 V9GYS6 101 aa12.13□□□□□ -0.47
IDH3A-219ENST00000560414 OR5B21A6NL26 309 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 EBAG9O00559 213 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 ENTPD6O75354 484 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 ALX3O95076 343 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 GABRA2P47869 451 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
IDH3A-219ENST00000560414 ALDH3A2P51648 485 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 ZNF85Q03923 595 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 DGUOKQ16854 277 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 LRRC10Q5BKY1 277 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 CLVS2Q5SYC1 327 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 ZNF788Q6ZQV5 615 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 CATSPERDQ86XM0 798 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 PDZD9Q8IXQ8 264 aa12.12□□□□□ -0.47
IDH3A-219ENST00000560414 ZNF671Q8TAW3 534 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms