RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 OR51E1Q8TCB6 317 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 WFDC12Q8WWY7 111 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 TAF15Q92804 592 aaKnown RBP eCLIP10.35□□□□□ -0.75
SNX1-209ENST00000559961 SEH1LQ96EE3 360 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 DUS3LQ96G46 650 aaKnown RBP10.35□□□□□ -0.75
SNX1-209ENST00000559961 ADI1Q9BV57 179 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 WDR13Q9H1Z4 485 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 HEXA-AS1Q9H8Q6 139 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 MOB1AQ9H8S9 216 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 GPR84Q9NQS5 396 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 KRT84Q9NSB2 600 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 ZNF670-ZNF695F2Z2N8 137 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 LOC110117498-PIK3R3F6TDL0 507 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 H3BUI4 141 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 PSMD9O00233 223 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 WIPF1O43516 503 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 ATP6V1E1P36543 226 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 HCCSP53701 268 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 TAF9Q16594 264 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 CLVS2Q5SYC1 327 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 BCL2L15Q5TBC7 163 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 HS3ST5Q8IZT8 346 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 OR51G2Q8NGK0 314 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 OR5K1Q8NHB7 308 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 BCAS4Q8TDM0 211 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 LYZL4Q96KX0 146 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 GAFA1Q96PS6 74 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 MMP27Q9H306 513 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 OR51I2Q9H344 312 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 PPP1R3EQ9H7J1 279 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 PLEKHA1Q9HB21 404 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 RAB18Q9NP72 206 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 VPREB3Q9UKI3 123 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 SLC7A11Q9UPY5 501 aa10.34□□□□□ -0.75
SNX1-209ENST00000559961 A0A1B0GW55 424 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 G3V2T6 193 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.33□□□□□ -0.76
SNX1-209ENST00000559961 ANGPTL7O43827 346 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 DHRS3O75911 302 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 NXPH2O95156 264 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 SERPINA3P01011 423 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 DUX4L2P0CJ85 424 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 DUX4L3P0CJ86 424 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 DUX4L4P0CJ87 422 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 DUX4L5P0CJ88 424 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 DUX4L6P0CJ89 424 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 DUX4L7P0CJ90 424 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 SLC2A5P22732 501 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 DEFA6Q01524 100 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 ROM1Q03395 351 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 PTGES3Q15185 160 aaKnown RBP10.33□□□□□ -0.76
SNX1-209ENST00000559961 DGUOKQ16854 277 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 MIDNQ504T8 468 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 DUX4L9Q6RFH8 374 aaPredicted RBP10.33□□□□□ -0.76
SNX1-209ENST00000559961 ZNF322Q6U7Q0 402 aaPredicted RBP10.33□□□□□ -0.76
SNX1-209ENST00000559961 MEPCEQ7L2J0 689 aaKnown RBP10.33□□□□□ -0.76
SNX1-209ENST00000559961 GID4Q8IVV7 300 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 ZNF561Q8N587 486 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 LINC01006Q8NI28 216 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 OR8B4Q96RC9 309 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 FAM206AQ9NX38 181 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 DUX4Q9UBX2 424 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 NUFIP1Q9UHK0 495 aaKnown RBP10.33□□□□□ -0.76
SNX1-209ENST00000559961 POMPQ9Y244 141 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 KLHDC2Q9Y2U9 406 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 SNX5Q9Y5X3 404 aa10.33□□□□□ -0.76
SNX1-209ENST00000559961 TCRBV3S1A0A5B6 114 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 RNASEK-C17orf49H0YIS7 233 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 DLGAP1O14490 977 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 KRT8P05787 483 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 PSG2P11465 335 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 FAHP16930 419 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 SAA4P35542 130 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 HAAOP46952 286 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 CXCR4P61073 352 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 RPL31P62899 125 aaKnown RBP10.32□□□□□ -0.76
SNX1-209ENST00000559961 ELF3P78545 371 aaPredicted RBP10.32□□□□□ -0.76
SNX1-209ENST00000559961 EGR3Q06889 387 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 ASRGL1Q7L266 308 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 ZDHHC13Q8IUH4 622 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 SLC35F2Q8IXU6 374 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 FGFRL1Q8N441 504 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 YIPF7Q8N8F6 280 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 ZSCAN4Q8NAM6 433 aaPredicted RBP10.32□□□□□ -0.76
SNX1-209ENST00000559961 ZNRF1Q8ND25 227 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 OR2T27Q8NH04 317 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 HPSE2Q8WWQ2 592 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 AQP3Q92482 292 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 CITED1Q99966 193 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 ZNRD1Q9P1U0 126 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 R4GMQ9 66 aa10.32□□□□□ -0.76
SNX1-209ENST00000559961 RFPL4AA6NLU0 287 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 RFPL4AL1F8VTS6 287 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 J3QT63 122 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 DYNC1I1O14576 645 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 RHBDL1O75783 438 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 ATP5HO75947 161 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 CLPXO76031 633 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 OCM2P0CE71 109 aa10.31□□□□□ -0.76
SNX1-209ENST00000559961 OCMP0CE72 109 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms