RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 ADAM30Q9UKF2 790 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 TMEM272A0A1B0GTI8 110 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 VSTM5A8MXK1 200 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 H0YL77 283 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 UBBP0CG47 229 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 PDZK1IP1Q13113 114 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 FAM76BQ5HYJ3 339 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 ASCL4Q6XD76 172 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 CALHM1Q8IU99 346 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 ACBD4Q8NC06 268 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 NEUROG1Q92886 237 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 DIRAS2Q96HU8 199 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 ABCG5Q9H222 651 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 CYSLTR2Q9NS75 346 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 TAAR3PQ9P1P4 343 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 FBLN5Q9UBX5 448 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 KLF2Q9Y5W3 355 aaPredicted RBP10.38□□□□□ -0.75
HERC1-205ENST00000559886 CHD3Q12873 2000 aaKnown RBP10.38□□□□□ -0.75
HERC1-205ENST00000559886 PKDREJQ9NTG1 2253 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 CLDN25C9JDP6 229 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 TMEM225BP0DP42 221 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 VSIG8P0DPA2 414 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 PLA2G7Q13093 441 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 SPANXN2Q5MJ10 180 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 CNIH2Q6PI25 160 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 SPERTQ8NA61 448 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 LILRB1Q8NHL6 650 aaPredicted RBP10.38□□□□□ -0.75
HERC1-205ENST00000559886 PTX4Q96A99 478 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 PLK3Q9H4B4 646 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 HMG20AQ9NP66 347 aa10.38□□□□□ -0.75
HERC1-205ENST00000559886 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
HERC1-205ENST00000559886 PLSCR5A0PG75 271 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 TMEM14DPA8MWL7 114 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 FAM25AB3EWG3 89 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 FAM25CB3EWG5 89 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 FAM25GB3EWG6 89 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 SERPINF1P36955 418 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 HAAOP46952 286 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 EFNB2P52799 333 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 ART1P52961 327 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 OR2W3Q7Z3T1 314 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 WDR86Q86TI4 376 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 ZNF573Q86YE8 665 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 CMTM4Q8IZR5 234 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 ZSCAN4Q8NAM6 433 aaPredicted RBP10.37□□□□□ -0.75
HERC1-205ENST00000559886 PXT1Q8NFP0 134 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 OR10AD1Q8NGE0 317 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 RAB40AQ8WXH6 277 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 OR51I2Q9H344 312 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 RHBDL2Q9NX52 303 aa10.37□□□□□ -0.75
HERC1-205ENST00000559886 SPTAN1Q13813 2472 aaKnown RBP10.37□□□□□ -0.75
HERC1-205ENST00000559886 ZSCAN5BA6NJL1 495 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 TMEM210A6NLX4 147 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 SPRY1O43609 319 aaPredicted RBP10.36□□□□□ -0.75
HERC1-205ENST00000559886 RAB6AP20340 208 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 APOBEC3AP31941 199 aaPredicted RBP10.36□□□□□ -0.75
HERC1-205ENST00000559886 ZNF45Q02386 682 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 UNC119Q13432 240 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 DAZAP2Q15038 168 aaPredicted RBP10.36□□□□□ -0.75
HERC1-205ENST00000559886 ZNF672Q499Z4 452 aaPredicted RBP10.36□□□□□ -0.75
HERC1-205ENST00000559886 OR10K2Q6IF99 312 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 ZNF611Q8N823 705 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 KCNG3Q8TAE7 436 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 GTF3AQ92664 365 aaKnown RBP10.36□□□□□ -0.75
HERC1-205ENST00000559886 S100A13Q99584 98 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 SOSTQ9BQB4 213 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 CXXC4Q9H2H0 198 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 NKIRAS2Q9NYR9 191 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 CISD1Q9NZ45 108 aaKnown RBP10.36□□□□□ -0.75
HERC1-205ENST00000559886 RAB22AQ9UL26 194 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 ING4Q9UNL4 249 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 ARFGEF3Q5TH69 2177 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 IGKV1-12A0A0C4DH73 117 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 LRP5LA4QPB2 252 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 F5H5P2 479 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 ANGPTL7O43827 346 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 PLATP00750 562 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 IGKV1D-12P01611 117 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 MPZP25189 248 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 MAB21L1Q13394 359 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 NKPD1Q17RQ9 610 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 SLC22A6Q4U2R8 563 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 SLC25A26Q70HW3 274 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 SAXO1Q8IYX7 474 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 OR2Z1Q8NG97 314 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 WDR12Q9GZL7 423 aaKnown RBP10.36□□□□□ -0.75
HERC1-205ENST00000559886 C14orf119Q9NWQ9 140 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 EXTL2Q9UBQ6 330 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 V9GYH0 126 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 COL12A1Q99715 3063 aa10.36□□□□□ -0.75
HERC1-205ENST00000559886 CLEC18AA5D8T8 446 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 FABP12A6NFH5 140 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 TALDO1P37837 337 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 MZT1Q08AG7 82 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 ZNF154Q13106 437 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 ZNF846Q147U1 533 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 EFNB3Q15768 340 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 HAGHLQ6PII5 290 aaPredicted RBP10.35□□□□□ -0.75
HERC1-205ENST00000559886 METAP1DQ6UB28 335 aaPredicted RBP10.35□□□□□ -0.75
HERC1-205ENST00000559886 CLEC18BQ6UXF7 455 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms