RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ANXA8P13928 327 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 NDUFB7P17568 137 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 GLRA1P23415 457 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 GABRA2P47869 451 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 EFNB1P98172 346 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 ROM1Q03395 351 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 PTGES3Q15185 160 aaKnown RBP11.06□□□□□ -0.64
VPS18-203ENST00000558855 SNAPC1Q16533 368 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 C11orf91Q3C1V1 193 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 LRRC10Q5BKY1 277 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 HAGHLQ6PII5 290 aaPredicted RBP11.06□□□□□ -0.64
VPS18-203ENST00000558855 MOB3CQ70IA8 216 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 C11orf42Q8N5U0 333 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 ZSCAN4Q8NAM6 433 aaPredicted RBP11.06□□□□□ -0.64
VPS18-203ENST00000558855 TBC1D15Q8TC07 691 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 RORBQ92753 470 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 DUS3LQ96G46 650 aaKnown RBP11.06□□□□□ -0.64
VPS18-203ENST00000558855 CADM1Q9BY67 442 aaKnown RBP11.06□□□□□ -0.64
VPS18-203ENST00000558855 DNTTIP1Q9H147 329 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 KIF17Q9P2E2 1029 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 SIGLEC9Q9Y336 463 aa11.06□□□□□ -0.64
VPS18-203ENST00000558855 MEX3AA1L020 520 aaKnown RBP11.05□□□□□ -0.64
VPS18-203ENST00000558855 NKX6-3A6NJ46 265 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 H3BSH0 61 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 MAP2K3P46734 347 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 CAV3P56539 151 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 GNG3P63215 75 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 CEACAM21Q3KPI0 293 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 MIDNQ504T8 468 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 PDLIM3Q53GG5 364 aaPredicted RBP11.05□□□□□ -0.64
VPS18-203ENST00000558855 AADACL4Q5VUY2 407 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 PLCXD3Q63HM9 321 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 ACP7Q6ZNF0 438 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 C17orf107Q6ZR85 190 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 TMEM185AQ8NFB2 350 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 PPP1R35Q8TAP8 253 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 FAM81AQ8TBF8 368 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 RBM4BQ9BQ04 359 aaKnown RBP11.05□□□□□ -0.64
VPS18-203ENST00000558855 ZNF556Q9HAH1 456 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 ADGRL4Q9HBW9 690 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 PAPOLBQ9NRJ5 636 aaKnown RBP11.05□□□□□ -0.64
VPS18-203ENST00000558855 GPR173Q9NS66 373 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 FAM53CQ9NYF3 392 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 NUFIP1Q9UHK0 495 aaKnown RBP11.05□□□□□ -0.64
VPS18-203ENST00000558855 MRM2Q9UI43 246 aaKnown RBP11.05□□□□□ -0.64
VPS18-203ENST00000558855 VPREB3Q9UKI3 123 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 SLC22A13Q9Y226 551 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 PIGLQ9Y2B2 252 aa11.05□□□□□ -0.64
VPS18-203ENST00000558855 A0A1B0GUS0 222 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 A0A1W2PQ09 198 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 MEIOCA2RUB1 952 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 GYG2O15488 501 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 MTRF1O75570 445 aaKnown RBP11.04□□□□□ -0.64
VPS18-203ENST00000558855 APOL3O95236 402 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 FBP1P09467 338 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 POLR2IP36954 125 aaKnown RBP11.04□□□□□ -0.64
VPS18-203ENST00000558855 ZNF273Q14593 569 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 SLX4IPQ5VYV7 408 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 TMEM42Q69YG0 159 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 C12orf73Q69YU5 71 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 MKXQ8IYA7 352 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 ZNF679Q8IYX0 411 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 TCEANCQ8N8B7 351 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 POC1AQ8NBT0 407 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 SDSLQ96GA7 329 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 IKZF2Q9UKS7 526 aa11.04□□□□□ -0.64
VPS18-203ENST00000558855 RFPL4AA6NLU0 287 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 ZAR1LA6NP61 321 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 RFPL4AL1F8VTS6 287 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 F8VVB4 439 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 F8VWA3 439 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 H3BUX3 64 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 M0R1W7 72 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 PGA5P0DJD9 388 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 CCL3L1P16619 93 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 BMXP51813 675 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 UBE2E1P51965 193 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 CXCR4P61073 352 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 RPL15P61313 204 aaKnown RBP11.03□□□□□ -0.64
VPS18-203ENST00000558855 LDLRAD2Q5SZI1 272 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 CRIP3Q6Q6R5 217 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 DEGS2Q6QHC5 323 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 COMMD2Q86X83 199 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 CALHM1Q8IU99 346 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 SLC35F2Q8IXU6 374 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 FAM185AQ8N0U4 392 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 DYNAPQ8N1N2 210 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 FTMTQ8N4E7 242 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 OR5A2Q8NGI9 324 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 OR14K1Q8NGZ2 314 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 RNF166Q96A37 237 aaPredicted RBP11.03□□□□□ -0.64
VPS18-203ENST00000558855 MED30Q96HR3 178 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 IL4I1Q96RQ9 567 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 CNN2Q99439 309 aaKnown RBP11.03□□□□□ -0.64
VPS18-203ENST00000558855 TBX5Q99593 518 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 C16orf95Q9H693 158 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 ABCB9Q9NP78 766 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 FAM96BQ9Y3D0 163 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 V9GYS6 101 aa11.03□□□□□ -0.64
VPS18-203ENST00000558855 IGKV1-27A0A075B6S5 117 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms