RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 LRTOMTQ8WZ04 291 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 LHX4Q969G2 390 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 ITFG2Q969R8 447 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 CLPTM1LQ96KA5 538 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 AMELYQ99218 206 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 CCL13Q99616 98 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 PKP2Q99959 881 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 THTPAQ9BU02 230 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 PRRG3Q9BZD7 231 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 CHIAQ9BZP6 476 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 CNTD2Q9H8S5 307 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 SLC25A19Q9HC21 320 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 TNFRSF19Q9NS68 423 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 TAS2R1Q9NYW7 299 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 LAMP5Q9UJQ1 280 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 LRP12Q9Y561 859 aa6.65□□□□□ -1.34
TRAF3-205ENST00000558700 ZNF816-ZNF321PA0A0X1KG74 233 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 ZNF850A8MQ14 1090 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 CST4P01036 141 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 FBP1P09467 338 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 T-ENOLP0DO92 83 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 EEF1B2P24534 225 aaKnown RBP6.64□□□□□ -1.35
TRAF3-205ENST00000558700 ACKR3P25106 362 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 CNN3Q15417 329 aaKnown RBP6.64□□□□□ -1.35
TRAF3-205ENST00000558700 ZNF829Q3KNS6 432 aaPredicted RBP6.64□□□□□ -1.35
TRAF3-205ENST00000558700 OLFML2AQ68BL7 652 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 KCTD18Q6PI47 426 aaPredicted RBP6.64□□□□□ -1.35
TRAF3-205ENST00000558700 METAP1DQ6UB28 335 aaPredicted RBP6.64□□□□□ -1.35
TRAF3-205ENST00000558700 GDPGP1Q6ZNW5 385 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 TMEM179BQ7Z7N9 219 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 SPATA24Q86W54 205 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 COMMD2Q86X83 199 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 CPOQ8IVL8 374 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 C11orf53Q8IXP5 236 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 OR8B12Q8NGG6 310 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 NRG4Q8WWG1 115 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 HPSE2Q8WWQ2 592 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 OR5P3Q8WZ94 311 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 H1FXQ92522 213 aaKnown RBP6.64□□□□□ -1.35
TRAF3-205ENST00000558700 DYRK2Q92630 601 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 TRIM63Q969Q1 353 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 RAB3IPQ96QF0 476 aaPredicted RBP6.64□□□□□ -1.35
TRAF3-205ENST00000558700 HIST1H2AAQ96QV6 131 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 DCTN5Q9BTE1 182 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 YIPF3Q9GZM5 350 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 DPAGT1Q9H3H5 408 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 HAO2Q9NYQ3 351 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 C1RLQ9NZP8 487 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 ZNF319Q9P2F9 582 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 DNAJB9Q9UBS3 223 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 KLHDC2Q9Y2U9 406 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 FAM96BQ9Y3D0 163 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 TMEM14AQ9Y6G1 99 aa6.64□□□□□ -1.35
TRAF3-205ENST00000558700 MEGF8Q7Z7M0 2845 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 A0A0U1RQK1 487 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 A0A0U1RQV5 110 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 A0A1B0GW55 424 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 CLPSL1A2RUU4 121 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 ACOD1A6NK06 481 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 OR5B21A6NL26 309 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 SIGLEC5O15389 551 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 AKR7A2O43488 359 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 GPR137BO60478 399 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 FKBP6O75344 327 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 FCN3O75636 299 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 H2AFB1P0C5Y9 115 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 H2AFB2P0C5Z0 115 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 DUX4L2P0CJ85 424 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 DUX4L3P0CJ86 424 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 DUX4L4P0CJ87 422 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 DUX4L5P0CJ88 424 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 DUX4L6P0CJ89 424 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 DUX4L7P0CJ90 424 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 ATP6V1B1P15313 513 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 ALOX5APP20292 161 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 SLC2A5P22732 501 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 DCTDP32321 178 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 GPM6AP51674 278 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 GMFBP60983 142 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 GNG3P63215 75 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 CBX1P83916 185 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 CDK5Q00535 292 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 APOFQ13790 326 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 ATPAF1Q5TC12 328 aaPredicted RBP6.63□□□□□ -1.35
TRAF3-205ENST00000558700 NCR3LG1Q68D85 454 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 DEGS2Q6QHC5 323 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 DUX4L9Q6RFH8 374 aaPredicted RBP6.63□□□□□ -1.35
TRAF3-205ENST00000558700 ZDHHC13Q8IUH4 622 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 PDZD9Q8IXQ8 264 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 HS3ST5Q8IZT8 346 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 LY6G5BQ8NDX9 201 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 BBS1Q8NFJ9 593 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 C8orf46Q8TAG6 207 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 NPRL2Q8WTW4 380 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 ASB17Q8WXJ9 295 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 PIGCQ92535 297 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 RPL3LQ92901 407 aaKnown RBP6.63□□□□□ -1.35
TRAF3-205ENST00000558700 MED30Q96HR3 178 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 RNF170Q96K19 258 aa6.63□□□□□ -1.35
TRAF3-205ENST00000558700 CNN2Q99439 309 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms