RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 TMEM160Q9NX00 188 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 SCN3BQ9NY72 215 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 SLC7A11Q9UPY5 501 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 IGHV3OR15-7A0A075B7D8 119 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 TRAV20A0A0B4J274 112 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 FAM230AA0A1W2PPH8 454 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 SRRM5B3KS81 715 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 PTGES3LE9PB15 166 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 MYL12BO14950 172 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 AKR7A2O43488 359 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 FOXH1O75593 365 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 ZFPL1O95159 310 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 WNT2P09544 360 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 PCMT1P22061 227 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 C21orf33P30042 268 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-205ENST00000558428 HAAOP46952 286 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 CDK5R1Q15078 307 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 UBE2V2Q15819 145 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 MICBQ29980 383 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 CR1LQ2VPA4 569 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 CCDC58Q4VC31 144 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 TEX36Q5VZQ5 186 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 XAF1Q6GPH4 301 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 RPL22L1Q6P5R6 122 aaKnown RBP10.33□□□□□ -0.76
SMAD3-205ENST00000558428 HAGHLQ6PII5 290 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-205ENST00000558428 LYPD2Q6UXB3 125 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 NLRC3Q7RTR2 1065 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 ZNF573Q86YE8 665 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 OR8B3Q8NGG8 313 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 ZNF671Q8TAW3 534 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 PP6455Q8WZ26 134 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 FGGYQ96C11 551 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 NEIL1Q96FI4 390 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-205ENST00000558428 TECTBQ96PL2 329 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 OR8B2Q96RD0 313 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 FKBP14Q9NWM8 211 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 BABAM2Q9NXR7 383 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 DNAJB11Q9UBS4 358 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 LRCH1Q9Y2L9 728 aa10.33□□□□□ -0.76
SMAD3-205ENST00000558428 NF1P21359 2839 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 JMJD1CQ15652 2540 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 PQLC2LA1A4F0 135 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 J3QT63 122 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 PHF1O43189 567 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-205ENST00000558428 ADAM20O43506 726 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 NDUFA2O43678 99 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 CRLF1O75462 422 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 RHBDL1O75783 438 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 GYPAP02724 150 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 CDK1P06493 297 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 RPSAP08865 295 aaKnown RBP10.32□□□□□ -0.76
SMAD3-205ENST00000558428 MUC1P15941 1255 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-205ENST00000558428 CPT2P23786 658 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 ZFP36P26651 326 aaKnown RBP10.32□□□□□ -0.76
SMAD3-205ENST00000558428 RIPPLY3P57055 190 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 GNB2P62879 340 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 CNN3Q15417 329 aaKnown RBP10.32□□□□□ -0.76
SMAD3-205ENST00000558428 IL17RELQ6ZVW7 336 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 FAM90A1Q86YD7 464 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 TSEN15Q8WW01 171 aaKnown RBP10.32□□□□□ -0.76
SMAD3-205ENST00000558428 AQP3Q92482 292 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 SEH1LQ96EE3 360 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 CNBD2Q96M20 576 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 SSBP3Q9BWW4 388 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-205ENST00000558428 SHARPINQ9H0F6 387 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 WDR13Q9H1Z4 485 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 CDC42EP3Q9UKI2 254 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 RAB26Q9ULW5 256 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 DHDHQ9UQ10 334 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 ERGIC3Q9Y282 383 aa10.32□□□□□ -0.76
SMAD3-205ENST00000558428 A8MXK9 166 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-205ENST00000558428 OGG1O15527 345 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 LALBAP00709 142 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 OCM2P0CE71 109 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 OCMP0CE72 109 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-205ENST00000558428 HOXB4P17483 251 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-205ENST00000558428 ATF1P18846 271 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 HNF1AP20823 631 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 GLRA1P23415 457 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 PITPNBP48739 271 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 FUT6P51993 359 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 CHRFAM7AQ494W8 412 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 FAM120AOSQ5T036 256 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 DCAF12L2Q5VW00 463 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 FAHD2BQ6P2I3 314 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-205ENST00000558428 UTS2BQ765I0 119 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 ANGPTL5Q86XS5 388 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 ZFP41Q8N8Y5 198 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 ZNF485Q8NCK3 441 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 RPS4Y2Q8TD47 263 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 MYDGFQ969H8 173 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 SMIM19Q96E16 107 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 BORCS8Q96FH0 119 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 FAHD2AQ96GK7 314 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 BEX2Q9BXY8 128 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 SNTG1Q9NSN8 517 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 CTSZQ9UBR2 303 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 LPAR3Q9UBY5 353 aa10.31□□□□□ -0.76
SMAD3-205ENST00000558428 CLN8Q9UBY8 286 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms