RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 METTL17Q9H7H0 456 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-211ENST00000557623 ERVK-18Q9QC07 812 aa10.44□□□□□ -0.74
SLIRP-211ENST00000557623 NKX1-2Q9UD57 310 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-211ENST00000557623 OR5V1Q9UGF6 321 aa10.44□□□□□ -0.74
SLIRP-211ENST00000557623 MYRFQ9Y2G1 1151 aa10.44□□□□□ -0.74
SLIRP-211ENST00000557623 SONP18583 2426 aaKnown RBP10.43□□□□□ -0.74
SLIRP-211ENST00000557623 LOC107986453A0A1B0GWG9 222 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 SRRM5B3KS81 715 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 GATBO75879 557 aaKnown RBP10.43□□□□□ -0.74
SLIRP-211ENST00000557623 SERPINA3P01011 423 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 EGR1P18146 543 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 ZFP36P26651 326 aaKnown RBP10.43□□□□□ -0.74
SLIRP-211ENST00000557623 KIR3DL2P43630 455 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 PITPNBP48739 271 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 GBX2P52951 348 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-211ENST00000557623 SEC61A1P61619 476 aaKnown RBP10.43□□□□□ -0.74
SLIRP-211ENST00000557623 SCGB2A2Q13296 93 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 MED21Q13503 144 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 ALKBH1Q13686 389 aaKnown RBP10.43□□□□□ -0.74
SLIRP-211ENST00000557623 SMN1Q16637 294 aaKnown RBP10.43□□□□□ -0.74
SLIRP-211ENST00000557623 ZNF573Q86YE8 665 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 C12orf43Q96C57 262 aaKnown RBP10.43□□□□□ -0.74
SLIRP-211ENST00000557623 PELI1Q96FA3 418 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 FGF23Q9GZV9 251 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-211ENST00000557623 VCX3BQ9H321 246 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 C7orf69Q9H7B7 122 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 GPR173Q9NS66 373 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 FRRS1LQ9P0K9 344 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 CLN8Q9UBY8 286 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 SLC7A11Q9UPY5 501 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 ZFHX3Q15911 3703 aa10.43□□□□□ -0.74
SLIRP-211ENST00000557623 WNK2Q9Y3S1 2297 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 SETD2Q9BYW2 2564 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-211ENST00000557623 ANKRD61A6NGH8 418 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 KIAA1324LA8MWY0 1029 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-211ENST00000557623 H0YJX3 145 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 PHF1O43189 567 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-211ENST00000557623 ADAM20O43506 726 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 GYPAP02724 150 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 CCDC159P0C7I6 412 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 MYL12AP19105 171 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 CD276Q5ZPR3 534 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 LYPD2Q6UXB3 125 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 BTNL3Q6UXE8 466 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 TMPRSS11AQ6ZMR5 421 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 SLC36A1Q7Z2H8 476 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 PRIMA1Q86XR5 153 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 FAM90A1Q86YD7 464 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 PP6455Q8WZ26 134 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 ZNF649Q9BS31 505 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 MRI1Q9BV20 369 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 TMPRSS13Q9BYE2 586 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 CHCHD3Q9NX63 227 aaKnown RBP10.42□□□□□ -0.74
SLIRP-211ENST00000557623 KAAG1Q9UBP8 84 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 DNAJB11Q9UBS4 358 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 HHLA2Q9UM44 414 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 EXOSC1Q9Y3B2 195 aaKnown RBP10.42□□□□□ -0.74
SLIRP-211ENST00000557623 INSIG2Q9Y5U4 225 aa10.42□□□□□ -0.74
SLIRP-211ENST00000557623 IGHV3OR15-7A0A075B7D8 119 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 A6NIN4 97 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 TRAPPC2LH3BP13 241 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 H3BSH0 61 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 TNFRSF13BO14836 293 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-211ENST00000557623 LIMS3P0CW19 117 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 LIMS4P0CW20 117 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 CD33P20138 364 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 GLRA1P23415 457 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 TGM4P49221 684 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 NANOS3P60323 173 aaKnown RBP10.41□□□□□ -0.74
SLIRP-211ENST00000557623 HOXA4Q00056 320 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-211ENST00000557623 CNN3Q15417 329 aaKnown RBP10.41□□□□□ -0.74
SLIRP-211ENST00000557623 C11orf91Q3C1V1 193 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 WDR25Q64LD2 544 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-211ENST00000557623 HAGHLQ6PII5 290 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-211ENST00000557623 ZNF841Q6ZN19 808 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 RDH10Q8IZV5 341 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 ZNF676Q8N7Q3 588 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 RAB40AQ8WXH6 277 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 AQP3Q92482 292 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 TFAP2CQ92754 450 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 TMEM80Q96HE8 168 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 CHST5Q9GZS9 411 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 COMMD4Q9H0A8 199 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 DNTTIP1Q9H147 329 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 ISG20L2Q9H9L3 353 aaKnown RBP10.41□□□□□ -0.74
SLIRP-211ENST00000557623 MMP26Q9NRE1 261 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 RASL12Q9NYN1 266 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 DIMT1Q9UNQ2 313 aaKnown RBP10.41□□□□□ -0.74
SLIRP-211ENST00000557623 POLDIP2Q9Y2S7 368 aa10.41□□□□□ -0.74
SLIRP-211ENST00000557623 CAB39Q9Y376 341 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-211ENST00000557623 LOC105371242A0A075B767 164 aa10.4□□□□□ -0.74
SLIRP-211ENST00000557623 IGHV2-70DA0A0C4DH43 119 aa10.4□□□□□ -0.74
SLIRP-211ENST00000557623 PQLC2LA1A4F0 135 aa10.4□□□□□ -0.74
SLIRP-211ENST00000557623 EFCAB10A6NFE3 127 aa10.4□□□□□ -0.74
SLIRP-211ENST00000557623 NKX6-3A6NJ46 265 aa10.4□□□□□ -0.74
SLIRP-211ENST00000557623 TMEM212A6NML5 194 aa10.4□□□□□ -0.74
SLIRP-211ENST00000557623 OR4C45A6NMZ5 311 aa10.4□□□□□ -0.74
SLIRP-211ENST00000557623 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.4□□□□□ -0.74
SLIRP-211ENST00000557623 J3QT63 122 aa10.4□□□□□ -0.74
SLIRP-211ENST00000557623 TMPRSS2O15393 492 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms