RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ALKBH3Q96Q83 286 aaPredicted RBP15.48■□□□□ 0.07
XRCC3-218ENST00000557439 CHST5Q9GZS9 411 aa15.48■□□□□ 0.07
XRCC3-218ENST00000557439 SIT1Q9Y3P8 196 aa15.48■□□□□ 0.07
XRCC3-218ENST00000557439 V9GYS6 101 aa15.48■□□□□ 0.07
XRCC3-218ENST00000557439 TRBV6-7A0A0A0MS04 114 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 CTRB1P17538 263 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 CTRB2Q6GPI1 263 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 OR2A2Q6IF42 318 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 OR4A4PQ8NGN8 299 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 MAFAQ8NHW3 353 aaPredicted RBP15.47■□□□□ 0.07
XRCC3-218ENST00000557439 TSNAXQ99598 290 aaKnown RBP15.47■□□□□ 0.07
XRCC3-218ENST00000557439 ZNF2Q9BSG1 426 aaPredicted RBP15.47■□□□□ 0.07
XRCC3-218ENST00000557439 PIGMQ9H3S5 423 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 PLEKHJ1Q9NW61 149 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 IGKV1-27A0A075B6S5 117 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 CEACAM18A8MTB9 384 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 SERPINA5P05154 406 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 THBS4P35443 961 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 ZNF239Q16600 458 aaKnown RBP15.47■□□□□ 0.07
XRCC3-218ENST00000557439 ACTBL2Q562R1 376 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 PLXDC2Q6UX71 529 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 Q7L0L9 218 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 SEMA6DQ8NFY4 1073 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 AKR7LQ8NHP1 331 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 CLDN23Q96B33 292 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 CPNE2Q96FN4 548 aaPredicted RBP15.47■□□□□ 0.07
XRCC3-218ENST00000557439 RAB18Q9NP72 206 aa15.47■□□□□ 0.07
XRCC3-218ENST00000557439 TMEM218A2RU14 115 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 FGF16O43320 207 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 ID4P47928 161 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 MTCP1P56278 107 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 C10orf128Q5T292 105 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 RPL7L1Q6DKI1 246 aaKnown RBP15.46■□□□□ 0.07
XRCC3-218ENST00000557439 PRSS54Q6PEW0 395 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 HAS2Q92819 552 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 NECAB3Q96P71 396 aaPredicted RBP15.46■□□□□ 0.07
XRCC3-218ENST00000557439 HRH4Q9H3N8 390 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 SHANK1Q9Y566 2161 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 LOC102725191A0A1B0GVB3 256 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 CCDC85CA6NKD9 419 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 ZNF705EA8MWA4 302 aaPredicted RBP15.46■□□□□ 0.07
XRCC3-218ENST00000557439 TSPAN9O75954 239 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 ATG12O94817 140 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 FAM157CP0CG43 387 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 B4GALT1P15291 398 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 CTSSP25774 331 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 SP6Q3SY56 376 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 PDSS1Q5T2R2 415 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 CBLN2Q8IUK8 224 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 POC1AQ8NBT0 407 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 SLC30A7Q8NEW0 376 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 STOML3Q8TAV4 291 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 SMIM3Q9BZL3 60 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 CRLF2Q9HC73 371 aa15.46■□□□□ 0.07
XRCC3-218ENST00000557439 FIGNL2A6NMB9 653 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 SSR4P51571 173 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 CYCSP99999 105 aaKnown RBP15.45■□□□□ 0.06
XRCC3-218ENST00000557439 TSPO2Q5TGU0 170 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 OPN5Q6U736 354 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 TOMM40LQ969M1 308 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 ANGPTL4Q9BY76 406 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 KIAA1549Q9HCM3 1950 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 CCDC187A0A096LP49 1063 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 A0A0U1RQV5 110 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 AGPAT2O15120 278 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 ONECUT2O95948 504 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 PDGFBP01127 241 aaPredicted RBP15.45■□□□□ 0.06
XRCC3-218ENST00000557439 SPEM2Q0P670 501 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 MST1LQ2TV78 715 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 FAM122CQ6P4D5 195 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 LDLRAD3Q86YD5 345 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 FGFBP3Q8TAT2 258 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 C2orf50Q96LR7 162 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 PARP12Q9H0J9 701 aaKnown RBP15.45■□□□□ 0.06
XRCC3-218ENST00000557439 TLNRD1Q9H1K6 362 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 SLC6A15Q9H2J7 730 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 HPF1Q9NWY4 346 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 FOXD3Q9UJU5 478 aaPredicted RBP15.45■□□□□ 0.06
XRCC3-218ENST00000557439 PCDHGA1Q9Y5H4 931 aa15.45■□□□□ 0.06
XRCC3-218ENST00000557439 LOC102723996A0A087X1L8 192 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 KLK3P07288 261 aaPredicted RBP15.44■□□□□ 0.06
XRCC3-218ENST00000557439 RFPL3SP0C7P2 107 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 FGF5P12034 268 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 CPT2P23786 658 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 OTX1P32242 354 aaPredicted RBP15.44■□□□□ 0.06
XRCC3-218ENST00000557439 DSCR4P56555 118 aaPredicted RBP15.44■□□□□ 0.06
XRCC3-218ENST00000557439 TAS2R46P59540 309 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 RBM39Q14498 530 aaKnown RBP15.44■□□□□ 0.06
XRCC3-218ENST00000557439 RPS19BP1Q86WX3 136 aaKnown RBP15.44■□□□□ 0.06
XRCC3-218ENST00000557439 MAML2Q8IZL2 1156 aaPredicted RBP15.44■□□□□ 0.06
XRCC3-218ENST00000557439 HLA-CQ95604 372 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 TREM1Q9NP99 234 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 FREM1Q5H8C1 2179 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 FBXO24O75426 580 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 SCGB1D2O95969 90 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 IGHV3-9P01782 118 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 CD79AP11912 226 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 NME2P22392 152 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 CBX5P45973 191 aa15.44■□□□□ 0.06
XRCC3-218ENST00000557439 IAH1Q2TAA2 248 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms