RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 FOXF1Q12946 379 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 TRAF3Q13114 568 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 SNAPC1Q16533 368 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 TATDN3Q17R31 274 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 PRAMEF5Q5TYX0 476 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 PRAMEF6Q5VXH4 476 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 OR8G2PQ6IF36 304 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 ZNF773Q6PK81 442 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 TMEM107Q6UX40 140 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 DLEU7Q6UYE1 221 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 TMPPEQ6ZT21 453 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 LINGO2Q7L985 606 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 SPATA19Q7Z5L4 167 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 HSD17B13Q7Z5P4 300 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-247ENST00000557311 CMC1Q7Z7K0 106 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 S100A7AQ86SG5 101 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 MRPL52Q86TS9 123 aaKnown RBP4.17□□□□□ -1.74
ATXN3-247ENST00000557311 NAA40Q86UY6 237 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 SNX29P2Q8IUI4 249 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 STPG2Q8N412 459 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 C17orf78Q8N4C9 275 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 OR2C3Q8N628 320 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 COMMD1Q8N668 190 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 YIPF7Q8N8F6 280 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 PTGR2Q8N8N7 351 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-247ENST00000557311 GATSQ8NAP1 163 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 OR4F6Q8NGB9 312 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 OR4K15Q8NH41 348 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 MCFD2Q8NI22 146 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 ADAMTS15Q8TE58 950 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 ZNF431Q8TF32 576 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-247ENST00000557311 SLC38A4Q969I6 547 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 MRGPRFQ96AM1 343 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 RASD2Q96D21 266 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 ZNF300Q96RE9 604 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-247ENST00000557311 RNF2Q99496 336 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 CITED1Q99966 193 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 CMSS1Q9BQ75 279 aaKnown RBP4.17□□□□□ -1.74
ATXN3-247ENST00000557311 TMEM208Q9BTX3 173 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 KATNB1Q9BVA0 655 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 MRPL13Q9BYD1 178 aaKnown RBP4.17□□□□□ -1.74
ATXN3-247ENST00000557311 MS4A7Q9GZW8 240 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-247ENST00000557311 NAA50Q9GZZ1 169 aaKnown RBP4.17□□□□□ -1.74
ATXN3-247ENST00000557311 COMMD4Q9H0A8 199 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 SLITRK2Q9H156 845 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 KLK15Q9H2R5 256 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 GLIPR2Q9H4G4 154 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 GPR35Q9HC97 309 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 CCNB1IP1Q9NPC3 277 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 SLC17A5Q9NRA2 495 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 CA10Q9NS85 328 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 MRPL22Q9NWU5 206 aaKnown RBP4.17□□□□□ -1.74
ATXN3-247ENST00000557311 MED29Q9NX70 200 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 LGALS13Q9UHV8 139 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 AMDHD2Q9Y303 409 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 ADAM18Q9Y3Q7 739 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 U3KQV3 271 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 PRR14LQ5THK1 2151 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 CADP27708 2225 aa4.17□□□□□ -1.74
ATXN3-247ENST00000557311 RPS10-NUDT3A0A1W2PQS6 291 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 TCRBV9S1A1TA0A576 114 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 AQP12BA6NM10 295 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 M0R143 59 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 MANBAO00462 879 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 COPEO14579 308 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 MGST3O14880 152 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 RNF13O43567 381 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 PCDH7O60245 1069 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 SELENOFO60613 162 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 NUDT14O95848 222 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 LALBAP00709 142 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 IFNA21P01568 189 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 CRYAAP02489 173 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 MSMBP08118 114 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 CCL2P13500 99 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 SRMP19623 302 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 GLRA1P23415 457 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 ETV6P41212 452 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 HTR5AP47898 357 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 P2RX1P51575 399 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 FGF8P55075 233 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 SUMO3P55854 103 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 NME5P56597 212 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 TMEM33P57088 247 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 RAP1AP62834 184 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 UBA52P62987 128 aaKnown RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 CSNK2A1P68400 391 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 RAE1P78406 368 aaKnown RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 RPL19P84098 196 aaKnown RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 DEFA5Q01523 94 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 ACSM2AQ08AH3 577 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 C2orf80Q0P641 193 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 EXOSC2Q13868 293 aaKnown RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 LARS2Q15031 903 aaKnown RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 QPRTQ15274 297 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 GUCA2BQ16661 112 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 HAGHQ16775 308 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 ATP6V1FQ16864 119 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 SPIN4Q56A73 249 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 SLC25A53Q5H9E4 307 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms