RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 PRSS48Q7RTY5 328 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 DEFB108BQ8NET1 73 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 PP6455Q8WZ26 134 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 GHSRQ92847 366 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 ZNF281Q9Y2X9 895 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 PPIAL4AQ9Y536 164 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 IGHV3OR15-7A0A075B7D8 119 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 IGKV1-9A0A0C4DH69 117 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 FAM157AC9JC47 383 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 SERPINA3P01011 423 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 LMO4P61968 165 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 CNN3Q15417 329 aaKnown RBP14.66□□□□□ -0.06
SHMT2-225ENST00000556798 SPHARQ15513 63 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 LRRC28Q86X40 367 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-225ENST00000556798 OR13C9Q8NGT0 318 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 GPR148Q8TDV2 347 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 ZNF665Q9H7R5 613 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 TMEM165Q9HC07 324 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 SLC7A11Q9UPY5 501 aa14.66□□□□□ -0.06
SHMT2-225ENST00000556798 IGKV1-27A0A075B6S5 117 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 CEACAM18A8MTB9 384 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 AKR7A2O43488 359 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 SYNGR1O43759 233 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 LHBP01229 141 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 IGHV2-5P01817 119 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 RPSAP08865 295 aaKnown RBP14.65□□□□□ -0.06
SHMT2-225ENST00000556798 OCM2P0CE71 109 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 ATF1P18846 271 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 HAAOP46952 286 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 GABARAPL2P60520 117 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 ZNF404Q494X3 552 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 TMEM155Q4W5P6 130 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 UTS2BQ765I0 119 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 CALHM1Q8IU99 346 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 MUC20Q8N307 709 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-225ENST00000556798 SPICQ8N5J4 248 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 MSI2Q96DH6 328 aaKnown RBP14.65□□□□□ -0.06
SHMT2-225ENST00000556798 SEH1LQ96EE3 360 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 TECTBQ96PL2 329 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 TMEM246Q9BRR3 403 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 LPAR2Q9HBW0 351 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 PCDHB10Q9UN67 800 aa14.65□□□□□ -0.06
SHMT2-225ENST00000556798 MTORP42345 2549 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 OOEPA6NGQ2 149 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-225ENST00000556798 LGALS8O00214 317 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 PLPP2O43688 288 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 PLATP00750 562 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 HEXAP06865 529 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 HSMCR30P0CW71 290 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 AZGP1P25311 298 aaKnown RBP14.64□□□□□ -0.07
SHMT2-225ENST00000556798 GZMKP49863 264 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 FUT6P51993 359 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 RPS11P62280 158 aaKnown RBP eCLIP14.64□□□□□ -0.07
SHMT2-225ENST00000556798 BDH1Q02338 343 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 ACSM1Q08AH1 577 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 CYB5R2Q6BCY4 276 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 ASPHD2Q6ICH7 369 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 ANGPTL5Q86XS5 388 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 ZNF573Q86YE8 665 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 BATF2Q8N1L9 274 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 PARP16Q8N5Y8 322 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 AQP3Q92482 292 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 TMEM106AQ96A25 262 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 ORAI1Q96D31 301 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 RAB39BQ96DA2 213 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 BORCS8Q96FH0 119 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 ZNF488Q96MN9 340 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 WDR13Q9H1Z4 485 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 ZCCHC4Q9H5U6 513 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 TAS2R4Q9NYW5 299 aa14.64□□□□□ -0.07
SHMT2-225ENST00000556798 WNK2Q9Y3S1 2297 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 TRBV5-5A0A0J9YX44 114 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 SRRM5B3KS81 715 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 J3QT63 122 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 CD5LO43866 347 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 OCMP0CE72 109 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-225ENST00000556798 RPS2P15880 293 aaKnown RBP14.63□□□□□ -0.07
SHMT2-225ENST00000556798 SEC61A1P61619 476 aaKnown RBP14.63□□□□□ -0.07
SHMT2-225ENST00000556798 TBCEQ15813 527 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-225ENST00000556798 YIF1BQ5BJH7 314 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 RNF144BQ7Z419 303 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 FAM90A1Q86YD7 464 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 SERPINA12Q8IW75 414 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 OR10Z1Q8NGY1 313 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 RFT1Q96AA3 541 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 OPALINQ96PE5 141 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 SPACA5Q96QH8 159 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 OR14A2Q96R54 314 aa14.63□□□□□ -0.07
SHMT2-225ENST00000556798 PATZ1Q9HBE1 687 aaKnown RBP14.63□□□□□ -0.07
SHMT2-225ENST00000556798 SULT1B1O43704 296 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 GYPAP02724 150 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 CD2P06729 351 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 CFHR2P36980 270 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 Q499Y3 187 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 LIPKQ5VXJ0 399 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 TEX36Q5VZQ5 186 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 LYPD2Q6UXB3 125 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 LINC01356Q8N9X3 169 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 OR51A2Q8NGJ7 313 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms