RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 MPZP25189 248 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 MPGP29372 298 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 RPS27P42677 84 aaKnown RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 GUCA1AP43080 201 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 OR3A2P47893 321 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CX3CR1P49238 355 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 MAP2K6P52564 334 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 EFNB2P52799 333 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 EMP2P54851 167 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 H2BFSP57053 126 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TAS2R46P59540 309 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 HNRNPKP61978 463 aaKnown RBP eCLIP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 RPS15P62841 145 aaKnown RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 POU3F1Q03052 451 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TLE3Q04726 772 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 SPOCK1Q08629 439 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 DHRS2Q13268 280 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 EIF3IQ13347 325 aaKnown RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 OR7A5Q15622 319 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 NSDHLQ15738 373 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 C14orf28Q4W4Y0 310 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 VWA2Q5GFL6 755 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TEX30Q5JUR7 227 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 DCAF12L2Q5VW00 463 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF660Q6AZW8 331 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 RTL6Q6ICC9 239 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 C3orf33Q6P1S2 294 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 HAGHLQ6PII5 290 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CBLN3Q6UW01 205 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 PGAP1Q75T13 922 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 KCTD9Q7L273 389 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 OR2W3Q7Z3T1 314 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 DCXRQ7Z4W1 244 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 PPP1R32Q7Z5V6 425 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 MARCH3Q86UD3 253 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 SLC25A42Q86VD7 318 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 IQCF2Q8IXL9 164 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 SVBPQ8N300 66 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 GTPBP8Q8N3Z3 284 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 GALNT16Q8N428 558 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TMEM185AQ8NFB2 350 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TSTD1Q8NFU3 115 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 OR4K17Q8NGC6 315 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 OR56B1Q8NGI3 324 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 OR4D10Q8NGI6 311 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 OR5D14Q8NGL3 314 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 OR5H2Q8NGV7 314 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 STOML3Q8TAV4 291 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CASTOR1Q8WTX7 329 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 ASB5Q8WWX0 329 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 SEH1LQ96EE3 360 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 LRRC46Q96FV0 321 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF285Q96NJ3 590 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 FOXN4Q96NZ1 517 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 GPER1Q99527 375 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 S100A13Q99584 98 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TSNAXQ99598 290 aaKnown RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 ABHD6Q9BV23 337 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TPSD1Q9BZJ3 242 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CHRNA10Q9GZZ6 450 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CST11Q9H112 138 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TCEAL2Q9H3H9 227 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 GAREM1Q9H706 876 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CHMP1AQ9HD42 196 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CHST11Q9NPF2 352 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 PCDHB16Q9NRJ7 776 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 ANKRD10Q9NXR5 420 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 ALKBH4Q9NXW9 302 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 RASL12Q9NYN1 266 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 KLRF1Q9NZS2 232 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 MLXQ9UH92 298 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 FBXL2Q9UKC9 423 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TNFSF18Q9UNG2 199 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 C14orf166Q9Y224 244 aaKnown RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 SLC22A13Q9Y226 551 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 MGAQ8IWI9 3026 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 GON4LQ3T8J9 2241 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 USP9YO00507 2555 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TP53BP1Q12888 1972 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 NUMA1Q14980 2115 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 FLNCQ14315 2725 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 TRAV14DV4A0A0A6YYC5 116 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 A0A1B0GTI1 187 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 C13orf42A0A1B0GVH6 325 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 A0A1B0GX78 115 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 A0A1W2PNV4 684 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 LOC390937A0A1W2PQ73 354 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 C9orf170A2RU37 121 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 CPED1A4D0V7 1026 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 EEF1E1-BLOC1S5C9J1V9 151 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 H7C2Y5 167 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 F2RL2O00254 374 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 DCTN6O00399 190 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 PLPP3O14495 311 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 CCSO14618 274 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 TOR1AO14656 332 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 TLX3O43711 291 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-241ENST00000556374 FADS1O60427 444 aa3.86□□□□□ -1.79
ATXN3-241ENST00000556374 SNAPINO95295 136 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms