RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	ACOT9	Q9Y305	439 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	PPIL1	Q9Y3C6	166 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	WIF1	Q9Y5W5	379 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	EIF4G1	Q04637	1599 aa	Known RBP	2.58	□□□□□ -2
KTN1-222	ENST00000555506	MYO10	Q9HD67	2058 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	IGHV6-1	A0A0B4J1U7	121 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	LINC00854	A0A1B0GVQ3	168 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506		M0R1B8	84 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	ZMPSTE24	O75844	475 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	CYB5R3	P00387	301 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-222	ENST00000555506	LIPC	P11150	499 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	PAX6	P26367	422 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	P2RY2	P41231	377 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	CD151	P48509	253 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	DNASE1L1	P49184	302 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	RGS6	P49758	472 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	PITPNA	Q00169	270 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	DMTN	Q08495	405 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	TNXA	Q16473	311 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	PRSS8	Q16651	343 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	FAHD1	Q6P587	224 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	ZNF880	Q6PDB4	577 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	SETD3	Q86TU7	594 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-222	ENST00000555506	ZCCHC24	Q8N2G6	241 aa	Known RBP	2.58	□□□□□ -2
KTN1-222	ENST00000555506	NT5C	Q8TCD5	201 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	CPNE4	Q96A23	557 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-222	ENST00000555506	S100PBP	Q96BU1	408 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	MRPL48	Q96GC5	212 aa	Known RBP	2.58	□□□□□ -2
KTN1-222	ENST00000555506	FBXO6	Q9NRD1	293 aa	Predicted RBP	2.58	□□□□□ -2
KTN1-222	ENST00000555506	CYTL1	Q9NRR1	136 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	CBY1	Q9Y3M2	126 aa		2.58	□□□□□ -2
KTN1-222	ENST00000555506	PLA2R1	Q13018	1463 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	NPHP4	O75161	1426 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-222	ENST00000555506	IGKV6-21	A0A0C4DH24	114 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	TMEM150B	A6NC51	233 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	LRCOL1	A6NCL2	159 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	ZNF850	A8MQ14	1090 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	CENPBD1	B2RD01	187 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	PSMB5	P28074	263 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	LCN1	P31025	176 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	EIF4EBP2	Q13542	120 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-222	ENST00000555506	DMC1	Q14565	340 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	TOMM34	Q15785	309 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-222	ENST00000555506	TTC32	Q5I0X7	151 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	H1FOO	Q8IZA3	346 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-222	ENST00000555506	DRAXIN	Q8NBI3	349 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-222	ENST00000555506	OR4D6	Q8NGJ1	314 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	PDCD1LG2	Q9BQ51	273 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	COPS4	Q9BT78	406 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	WDR55	Q9H6Y2	383 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-222	ENST00000555506	RMND1	Q9NWS8	449 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	SDHAF2	Q9NX18	166 aa		2.57	□□□□□ -2
KTN1-222	ENST00000555506	NUP214	P35658	2090 aa	Predicted RBP	2.56	□□□□□ -2
KTN1-222	ENST00000555506	MGAT4D	A6NG13	374 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506		K7ERQ8	282 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	YKT6	O15498	198 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	RRP8	O43159	456 aa	Known RBP	2.56	□□□□□ -2
KTN1-222	ENST00000555506	PRB2	P02812	416 aa	Predicted RBP	2.56	□□□□□ -2
KTN1-222	ENST00000555506	IL4	P05112	153 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	PRKACB	P22694	351 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	IL3RA	P26951	378 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	PPP1CA	P62136	330 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	IL5RA	Q01344	420 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	LAMTOR4	Q0VGL1	99 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	MOBP	Q13875	183 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	GPR176	Q14439	515 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	ACTL10	Q5JWF8	245 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	SYT6	Q5T7P8	510 aa	Predicted RBP	2.56	□□□□□ -2
KTN1-222	ENST00000555506	ZNF101	Q8IZC7	436 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	SLC25A29	Q8N8R3	303 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	DOK4	Q8TEW6	326 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	ADTRP	Q96IZ2	230 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	CTRC	Q99895	268 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	TMED9	Q9BVK6	235 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	2.56	□□□□□ -2
KTN1-222	ENST00000555506	PRORY	Q9H606	182 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	ACOT13	Q9NPJ3	140 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	CLEC2D	Q9UHP7	191 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	ORC6	Q9Y5N6	252 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	ARID1A	O14497	2285 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	SIGLEC1	Q9BZZ2	1709 aa		2.56	□□□□□ -2
KTN1-222	ENST00000555506	DOCK9	Q9BZ29	2069 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	IGHV1-3	A0A0C4DH29	117 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506		A0A1B0GW15	77 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	SLC5A10	A0PJK1	596 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	COLCA2	A8K830	154 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	NDUFS5	O43920	106 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	SCO1	O75880	301 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	RPN2	P04844	631 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	PSMB2	P49721	201 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	CMC4	P56277	68 aa	Predicted RBP	2.55	□□□□□ -2
KTN1-222	ENST00000555506	OR12D2	P58182	307 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	TAS2R43	P59537	309 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	C2orf80	Q0P641	193 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	PSG3	Q16557	428 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	FBXL19-AS1	Q494R0	122 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	FAM222A	Q5U5X8	452 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	UNQ9165/PRO28630	Q6UXU0	137 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	SPANXA2-OT1	Q8N9U9	137 aa		2.55	□□□□□ -2
KTN1-222	ENST00000555506	OR5M1	Q8NGP8	315 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms