RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 GLRA1P23415 457 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 CFHR2P36980 270 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 KIR3DL2P43630 455 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 HAAOP46952 286 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 GBX2P52951 348 aaPredicted RBP10.1□□□□□ -0.79
SRP54-206ENST00000555317 HOXA4Q00056 320 aaPredicted RBP10.1□□□□□ -0.79
SRP54-206ENST00000555317 CNN3Q15417 329 aaKnown RBP10.1□□□□□ -0.79
SRP54-206ENST00000555317 SMN1Q16637 294 aaKnown RBP10.1□□□□□ -0.79
SRP54-206ENST00000555317 FAM76BQ5HYJ3 339 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 DMRTC1Q5HYR2 192 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 LYPD2Q6UXB3 125 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 TMPRSS11AQ6ZMR5 421 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 KRT74Q7RTS7 529 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 SLC36A1Q7Z2H8 476 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 EGFL6Q8IUX8 553 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 C10orf35Q96D05 121 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 PELI1Q96FA3 418 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 COMMD4Q9H0A8 199 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 OR51I2Q9H344 312 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 POLDIP2Q9Y2S7 368 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 POLR3KQ9Y2Y1 108 aaPredicted RBP10.1□□□□□ -0.79
SRP54-206ENST00000555317 AUP1Q9Y679 476 aa10.1□□□□□ -0.79
SRP54-206ENST00000555317 IGHV2-70DA0A0C4DH43 119 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 FAM230AA0A1W2PPH8 454 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 ENSAO43768 121 aaKnown RBP10.09□□□□□ -0.79
SRP54-206ENST00000555317 ADRA2CP18825 462 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 DCKP27707 260 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 CCR9P51686 369 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 ADARB1P78563 741 aaKnown RBP10.09□□□□□ -0.79
SRP54-206ENST00000555317 ALKBH1Q13686 389 aaKnown RBP10.09□□□□□ -0.79
SRP54-206ENST00000555317 SMIM21Q3B7S5 101 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 WDR25Q64LD2 544 aaPredicted RBP10.09□□□□□ -0.79
SRP54-206ENST00000555317 TMEM42Q69YG0 159 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 FDX2Q6P4F2 183 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 C1QL2Q7Z5L3 287 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 RDH10Q8IZV5 341 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 OR13C3Q8NGS6 347 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 TRMT10AQ8TBZ6 339 aaKnown RBP10.09□□□□□ -0.79
SRP54-206ENST00000555317 NPRL2Q8WTW4 380 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 PP6455Q8WZ26 134 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 ST8SIA4Q92187 359 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 TMIGD2Q96BF3 282 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 NUDT16L1Q9BRJ7 211 aaKnown RBP10.09□□□□□ -0.79
SRP54-206ENST00000555317 TMPRSS13Q9BYE2 586 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 CHST5Q9GZS9 411 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 OCEL1Q9H607 264 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 MMP26Q9NRE1 261 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 MRPS18AQ9NVS2 196 aaKnown RBP10.09□□□□□ -0.79
SRP54-206ENST00000555317 FRRS1LQ9P0K9 344 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 HHLA2Q9UM44 414 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 EXOSC1Q9Y3B2 195 aaKnown RBP10.09□□□□□ -0.79
SRP54-206ENST00000555317 INSIG2Q9Y5U4 225 aa10.09□□□□□ -0.79
SRP54-206ENST00000555317 EFCAB10A6NFE3 127 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 TMEM212A6NML5 194 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 TRAPPC2LH3BP13 241 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 J3QT63 122 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 NDUFB3O43676 98 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 RHBDL1O75783 438 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 ISG15P05161 165 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 FUT6P51993 359 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 LRRC10Q5BKY1 277 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 Q6ZSR3 168 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 BPIFB2Q8N4F0 458 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 PNLDC1Q8NA58 520 aaKnown RBP10.08□□□□□ -0.8
SRP54-206ENST00000555317 OR5AK2Q8NH90 309 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 TSEN15Q8WW01 171 aaKnown RBP10.08□□□□□ -0.8
SRP54-206ENST00000555317 RAB40AQ8WXH6 277 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 AQP3Q92482 292 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 BORCS8Q96FH0 119 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 TMEM80Q96HE8 168 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 CCL13Q99616 98 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 JAM3Q9BX67 310 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 FGF23Q9GZV9 251 aaPredicted RBP10.08□□□□□ -0.8
SRP54-206ENST00000555317 DNTTIP1Q9H147 329 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 WDR13Q9H1Z4 485 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 ISG20L2Q9H9L3 353 aaKnown RBP10.08□□□□□ -0.8
SRP54-206ENST00000555317 NEK6Q9HC98 313 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 FGF20Q9NP95 211 aaPredicted RBP10.08□□□□□ -0.8
SRP54-206ENST00000555317 SNTG1Q9NSN8 517 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 RASL12Q9NYN1 266 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 NLKQ9UBE8 527 aa10.08□□□□□ -0.8
SRP54-206ENST00000555317 NKX1-2Q9UD57 310 aaPredicted RBP10.08□□□□□ -0.8
SRP54-206ENST00000555317 TRBV2A0A0J9YWF9 115 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 PQLC2LA1A4F0 135 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 DVL1O14640 695 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 TCF21O43680 179 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 NXPH2O95156 264 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 ECDO95905 644 aaPredicted RBP10.07□□□□□ -0.8
SRP54-206ENST00000555317 CYB5AP00167 134 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 GNAO1P09471 354 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 EPHA1P21709 976 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 PRKACBP22694 351 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 GABRA2P47869 451 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 NANOS3P60323 173 aaKnown RBP10.07□□□□□ -0.8
SRP54-206ENST00000555317 IL13RA1P78552 427 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 IKZF1Q13422 519 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 OR5T2Q8NGG2 359 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 ZNF418Q8TF45 676 aaPredicted RBP10.07□□□□□ -0.8
SRP54-206ENST00000555317 FGGYQ96C11 551 aa10.07□□□□□ -0.8
SRP54-206ENST00000555317 MED30Q96HR3 178 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms