RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 AGMATQ9BSE5 352 aa3.17□□□□□ -1.9
CKS1BP1-201ENST00000555221 TMEM243Q9BU79 118 aa3.17□□□□□ -1.9
CKS1BP1-201ENST00000555221 GGTLC1Q9BX51 225 aa3.17□□□□□ -1.9
CKS1BP1-201ENST00000555221 CYP3A43Q9HB55 503 aa3.17□□□□□ -1.9
CKS1BP1-201ENST00000555221 C8orf17Q9NRJ1 99 aa3.17□□□□□ -1.9
CKS1BP1-201ENST00000555221 GOLGB1Q14789 3259 aaKnown RBP3.17□□□□□ -1.9
CKS1BP1-201ENST00000555221 BTAF1O14981 1849 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 ZNF99A8MXY4 864 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 MPZL1O95297 269 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 PAHP00439 452 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 IGHV3-11P01762 117 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 DCNP07585 359 aaKnown RBP3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 ZNF806P0C7X5 589 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 SRMP19623 302 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 PMCHP20382 165 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 TUBG1P23258 451 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 RPS12P25398 132 aaKnown RBP3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 GABRR2P28476 465 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 BMI1P35226 326 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 PCK1P35558 622 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 OR2B8PP59922 312 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 PNOCQ13519 176 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 TMPRSS11AQ6ZMR5 421 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 KIF2BQ8N4N8 673 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 NECAP1Q8NC96 275 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 OR52P1PQ8NH57 321 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 ESR2Q92731 530 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 RERGQ96A58 199 aaPredicted RBP3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 SCGB3A2Q96PL1 93 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 TUBG2Q9NRH3 451 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 ADA2Q9NZK5 511 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 GGA2Q9UJY4 613 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 COMMD3-BMI1R4GMX3 469 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 SBF2Q86WG5 1849 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 CABIN1Q9Y6J0 2220 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 MROH5Q6ZUA9 1318 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 MYO3BQ8WXR4 1341 aa3.16□□□□□ -1.9
CKS1BP1-201ENST00000555221 SCN11AQ9UI33 1791 aa3.15□□□□□ -1.9
CKS1BP1-201ENST00000555221 RTL9Q8NET4 1388 aa3.15□□□□□ -1.9
CKS1BP1-201ENST00000555221 NUP214P35658 2090 aaPredicted RBP3.15□□□□□ -1.9
CKS1BP1-201ENST00000555221 TRAV40A0A0B4J280 105 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 IGHV7-4-1A0A0J9YVY3 117 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 CENPVL3A0A0U1RRI6 287 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 C5orf63A6NC05 138 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 CENPXA8MT69 81 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 CATP04040 527 aaKnown RBP3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 ME2P23368 584 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 CD70P32970 193 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 PMELP40967 661 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 ATP6V0D1P61421 351 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 LCN2P80188 198 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 IFITM3Q01628 133 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 KRTAP13-3Q3SY46 172 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 RNASE13Q5GAN3 156 aaKnown RBP3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 MLIPQ5VWP3 458 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 MDP1Q86V88 176 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 TTLQ8NG68 377 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 CIRBP-AS1Q8TBR5 109 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 RXFP4Q8TDU9 374 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 SLC25A46Q96AG3 418 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 COA1Q9GZY4 146 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 TDRD3Q9H7E2 651 aaKnown RBP3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 FANCEQ9HB96 536 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 PRSS16Q9NQE7 514 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 TREX1Q9NSU2 369 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 RHBDL2Q9NX52 303 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 UBIAD1Q9Y5Z9 338 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 RIC1Q4ADV7 1423 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 C4BP0C0L5 1744 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 RGPD2P0DJD1 1756 aa3.15□□□□□ -1.91
CKS1BP1-201ENST00000555221 C5P01031 1676 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 KCPQ6ZWJ8 1503 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 LY75O60449 1722 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR5H1A6NKK0 313 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 GOLGA8JA6NMD2 632 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 H3BN98 237 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 RRP8O43159 456 aaKnown RBP3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 CIAO1O76071 339 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 RCBTB2O95199 551 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 IL4P05112 153 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 IGKV5-2P06315 115 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF286BP0CG31 522 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 GOLGA8HP0CJ92 632 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 GGT2P36268 569 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 RGS19P49795 217 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 TAS2R39P59534 338 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 FKBP1AP62942 108 aaKnown RBP3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 PITPNAQ00169 270 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 SIGLEC14Q08ET2 396 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF816Q0VGE8 651 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 CDC20Q12834 499 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 MOBPQ13875 183 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 HSP90AA4PQ58FG1 418 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 YIF1BQ5BJH7 314 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR2T5Q6IEZ7 315 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 CD300LGQ6UXG3 332 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 USP50Q70EL3 339 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 RAB43Q86YS6 212 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 ITPRIPQ8IWB1 547 aa3.14□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF321PQ8N8H1 164 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms