RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 HCKP08631 526 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 MPZP25189 248 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 CALRP27797 417 aaKnown RBP13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 KISS1Q15726 138 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 MPPED2Q15777 294 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 SPRNQ5BIV9 151 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 FAM27D1Q5T7N8 215 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 PRAMEF6Q5VXH4 476 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 MOGAT3Q86VF5 341 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 C1orf87Q8N0U7 546 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 SCCPDHQ8NBX0 429 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 OR51A2Q8NGJ7 313 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 OR10Z1Q8NGY1 313 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 TRMT10AQ8TBZ6 339 aaKnown RBP13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 NPRL2Q8WTW4 380 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 FOXC2Q99958 501 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 FUNDC2Q9BWH2 189 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 OR51E2Q9H255 320 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 PPIL3Q9H2H8 161 aaKnown RBP13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 CHODLQ9H9P2 273 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 EXOSC4Q9NPD3 245 aaKnown RBP13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 POLDIP2Q9Y2S7 368 aa13.89□□□□□ -0.19
SPTLC2-203ENST00000554901 NDUFS8O00217 210 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 AIREO43918 545 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 RP2O75695 350 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 FSTL3O95633 263 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 ACAA1P09110 424 aaPredicted RBP13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 IRF2P14316 349 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 MYL9P24844 172 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 HAAOP46952 286 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 PSMD7P51665 324 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 TMEM33P57088 247 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 IL24Q13007 206 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 DMRTC1Q5HYR2 192 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 C22orf42Q6IC83 251 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 C11orf53Q8IXP5 236 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 ZNF671Q8TAW3 534 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 AQP3Q92482 292 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 TMIGD2Q96BF3 282 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 FOXRED1Q96CU9 486 aaPredicted RBP13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 ORAI1Q96D31 301 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 KCTD7Q96MP8 289 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 CHCHD6Q9BRQ6 235 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 TMEM106BQ9NUM4 274 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 PDZD2O15018 2839 aa13.88□□□□□ -0.19
SPTLC2-203ENST00000554901 IGKV1-27A0A075B6S5 117 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 SSX4O60224 188 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 CD37P11049 281 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 RANBP1P43487 201 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 PDLIM4P50479 330 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 DDI2Q5TDH0 399 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 HAGHLQ6PII5 290 aaPredicted RBP13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 WDR82Q6UXN9 313 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 LRRTM1Q86UE6 522 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 ANKRD13BQ86YJ7 626 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 PNLDC1Q8NA58 520 aaKnown RBP13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 ZSCAN4Q8NAM6 433 aaPredicted RBP13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 OR52N4Q8NGI2 321 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 CCL17Q92583 94 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 RPL3LQ92901 407 aaKnown RBP13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 METTL17Q9H7H0 456 aaPredicted RBP13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 UFSP2Q9NUQ7 469 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 C1orf123Q9NWV4 160 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 RNF7Q9UBF6 113 aa13.87□□□□□ -0.19
SPTLC2-203ENST00000554901 CDIPTO14735 213 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 PDCD5O14737 125 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 CDC14BO60729 498 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 NOS1APO75052 506 aaPredicted RBP13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 LY6HO94772 140 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 CYB5AP00167 134 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 MAS1P04201 325 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 COL8A2P25067 703 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 GIFP27352 417 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 ZNF93P35789 620 aaPredicted RBP13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 MTNR1BP49286 362 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 SHEQ5VZ18 495 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 GLT8D1Q68CQ7 371 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 CLEC2AQ6UVW9 174 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 DNM1P46Q6ZS02 220 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 TPRA1Q86W33 373 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 CALHM1Q8IU99 346 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 MKXQ8IYA7 352 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 SAXO1Q8IYX7 474 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 YIPF5Q969M3 257 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 UQCC2Q9BRT2 126 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 RHOFQ9HBH0 211 aa13.86□□□□□ -0.19
SPTLC2-203ENST00000554901 IGHV3-64DA0A0J9YX35 117 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 LOC100506127A0A0U1RQW1 187 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 hCG_1807616A0A1W2PRN6 198 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 CLDN25C9JDP6 229 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 TMEM178BH3BS89 294 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 GABARAPO95166 117 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 ADRA2CP18825 462 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 PMELP40967 661 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 PDZK1IP1Q13113 114 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 RIN1Q13671 783 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 CRIP3Q6Q6R5 217 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 PEG10Q86TG7 708 aaKnown RBP13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 ANGPTL5Q86XS5 388 aa13.85□□□□□ -0.19
SPTLC2-203ENST00000554901 LYPD6Q86Y78 171 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms