RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SPOPO43791 374 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 NDUFS5O43920 106 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 ALOX12BO75342 701 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 CCNOP22674 350 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 IL3RAP26951 378 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 ARR3P36575 388 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 RGS6P49758 472 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 TAS2R43P59537 309 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 TAS2R60P59551 318 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 PPP1CAP62136 330 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 GRB2P62993 217 aaKnown RBP1.77□□□□□ -2.13
SCFD1-213ENST00000554776 ELF3P78545 371 aaPredicted RBP1.77□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF616Q08AN1 781 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 TNXAQ16473 311 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 LY6EQ16553 131 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 HHATQ5VTY9 493 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 ERO1BQ86YB8 467 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 SYS1Q8N2H4 156 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 LRRC52Q8N7C0 313 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 TRIML2Q8N7C3 387 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 OR6N2Q8NGY6 317 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 C17orf50Q8WW18 174 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 CDKL2Q92772 493 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 HGDQ93099 445 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 WDR34Q96EX3 536 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 ADTRPQ96IZ2 230 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 LINC00477Q96M19 166 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 ZFP3Q96NJ6 502 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 RSPO3Q9BXY4 272 aaPredicted RBP1.77□□□□□ -2.13
SCFD1-213ENST00000554776 FRMD8P1Q9BZ68 369 aaPredicted RBP1.77□□□□□ -2.13
SCFD1-213ENST00000554776 STMN4Q9H169 189 aaPredicted RBP1.77□□□□□ -2.13
SCFD1-213ENST00000554776 VCX3AQ9NNX9 186 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 CLEC2DQ9UHP7 191 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 RAB23Q9ULC3 237 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 ORC6Q9Y5N6 252 aa1.77□□□□□ -2.13
SCFD1-213ENST00000554776 SETD1AO15047 1707 aaKnown RBP1.77□□□□□ -2.13
SCFD1-213ENST00000554776 AQRO60306 1485 aaKnown RBP eCLIP1.76□□□□□ -2.132e-7■□□□□ 8.7
SCFD1-213ENST00000554776 TMEM131Q92545 1883 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 BRWD3Q6RI45 1802 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 IGHV6-1A0A0B4J1U7 121 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 IGHV1-3A0A0C4DH29 117 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 IGKV1-6A0A0C4DH72 117 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 LOC100506127A0A0U1RQW1 187 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 SPRR5A0A1B0GTR4 108 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 A0A1B0GW15 77 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 GSTTP1A0A1W2PQM5 241 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 MGAT4DA6NG13 374 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 IGKV1-39P01597 117 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 IGKV1D-39P04432 117 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 MMP7P09237 267 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-213ENST00000554776 GPR4P46093 362 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 UBE2KP61086 200 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 KDSRQ06136 332 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 LAMTOR4Q0VGL1 99 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 GPR176Q14439 515 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 PMVKQ15126 192 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 Q3ZCU0 254 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 TTC32Q5I0X7 151 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 SLC25A34Q6PIV7 304 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 PRNTQ86SH4 94 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 SETD3Q86TU7 594 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-213ENST00000554776 PDPNQ86YL7 162 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 H1FOOQ8IZA3 346 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF561Q8N587 486 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 GATSQ8NAP1 163 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 OR2Z1Q8NG97 314 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF420Q8TAQ5 688 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-213ENST00000554776 RMI2Q96E14 147 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 SNF8Q96H20 258 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 GLT1D1Q96MS3 346 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 CHCHD7Q9BUK0 85 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 COA1Q9GZY4 146 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 ING2Q9H160 280 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 SYT4Q9H2B2 425 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 SLC38A1Q9H2H9 487 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 DHX35Q9H5Z1 703 aaKnown RBP1.76□□□□□ -2.13
SCFD1-213ENST00000554776 PLEKHF2Q9H8W4 249 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF302Q9NR11 478 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 SDHAF2Q9NX18 166 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 CFL2Q9Y281 166 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 ADAMTSL3P82987 1691 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 SCN1AP35498 2009 aa1.76□□□□□ -2.13
SCFD1-213ENST00000554776 IGLV3-12A0A075B6K2 115 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 TRAV40A0A0B4J280 105 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 A0A0G2JMP0 313 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 A0A0X1KG70 313 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 A8MUU9 505 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 M0R1B8 84 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 RNF113AO15541 343 aaKnown RBP1.75□□□□□ -2.13
SCFD1-213ENST00000554776 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 CNMDO75829 334 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 RBBP9O75884 186 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 CDRT1O95170 752 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 RCBTB2O95199 551 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 VAPBO95292 243 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 OR5AL1P0C617 328 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 CCL2P13500 99 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 P2RY2P41231 377 aa1.75□□□□□ -2.13
SCFD1-213ENST00000554776 HADHBP55084 474 aaKnown RBP1.75□□□□□ -2.13
SCFD1-213ENST00000554776 KRTAP10-10P60014 251 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms