RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 LHX2P50458 406 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 DVL1P1P54792 670 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 MAZP56270 477 aaKnown RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ACY1Q03154 408 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ZNF146Q15072 292 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 POU2AF1Q16633 256 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 PLEKHN1Q494U1 663 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 FCRLBQ6BAA4 426 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 HEPN1Q6WQI6 88 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 FBXW12Q6X9E4 464 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ETV3LQ6ZN32 361 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 MDGA2Q7Z553 956 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 SKA2Q8WVK7 121 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 RASL10BQ96S79 203 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 P2RX4Q99571 388 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 VRK1Q99986 396 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 RBCK1Q9BYM8 510 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 FOXQ1Q9C009 403 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 NKX6-2Q9C056 277 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 SLC25A18Q9H1K4 315 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 PATZ1Q9HBE1 687 aaKnown RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 LYRM2Q9NU23 88 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 VDAC3Q9Y277 283 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 A0A0G2JN53 185 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 C5orf63A6NC05 138 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 TIAF1O95411 115 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 RAB3DO95716 219 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 SP1P08047 785 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 NUP62P37198 522 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 NR0B1P51843 470 aaKnown RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 RAC3P60763 192 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 HERPUD1Q15011 391 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 Q3ZCU0 254 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 SPOUT1Q5T280 376 aaKnown RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 C6orf183Q5T699 404 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 BAP18Q8IXM2 172 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 C2orf73Q8N5S3 287 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ACBD4Q8NC06 268 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 C1orf162Q8NEQ5 155 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 STT3BQ8TCJ2 826 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ELMOD3Q96FG2 381 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 TSSK2Q96PF2 358 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 PHB2Q99623 299 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 DPCDQ9BVM2 203 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 NAA60Q9H7X0 242 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 PTGES2Q9H7Z7 377 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 EXOSC4Q9NPD3 245 aaKnown RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 SDHAF3Q9NRP4 125 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 MKL2Q9ULH7 1088 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 NCOA6Q14686 2063 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 TRAV6A0A075B6T7 132 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 MSGN1A6NI15 193 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 TRDCB7Z8K6 153 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 L7N2F9 121 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 TNFSF11O14788 317 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 DUX1O43812 170 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 LY86O95711 162 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ADH4P08319 380 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 SMIM6P0DI80 62 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 MSR1P21757 451 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 MAGEB1P43366 347 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 CLDN18P56856 261 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 RBM11P57052 281 aaKnown RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 TSPAN5P62079 268 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 NKAPLQ5M9Q1 402 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 GLYATL3Q5SZD4 288 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ARHGAP40Q5TG30 622 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 LIAT1Q6ZQX7 453 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 PPP1R32Q7Z5V6 425 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 UBALD2Q8IYN6 164 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 TMEFF1Q8IYR6 380 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 TMEM104Q8NE00 496 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 OR10H5Q8NGA6 315 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 OR6N2Q8NGY6 317 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 RNF141Q8WVD5 230 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 PPP1R1CQ8WVI7 109 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 PHF21AQ96BD5 680 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 MUCL1Q96DR8 90 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ARL5BQ96KC2 179 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ELF4Q99607 663 aaPredicted RBP2.96□□□□□ -1.94
SEC23A-207ENST00000554615 SRXN1Q9BYN0 137 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 TMEM222Q9H0R3 208 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ZDHHC11Q9H8X9 412 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 SIRT7Q9NRC8 400 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 OR5AC2Q9NZP5 309 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 TAAR3PQ9P1P4 343 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 ANXA10Q9UJ72 324 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 OR10H1Q9Y4A9 318 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 LY96Q9Y6Y9 160 aa2.96□□□□□ -1.94
SEC23A-207ENST00000554615 IGKV1-6A0A0C4DH72 117 aa2.95□□□□□ -1.94
SEC23A-207ENST00000554615 LRP5LA4QPB2 252 aa2.95□□□□□ -1.94
SEC23A-207ENST00000554615 B4DEV8 164 aa2.95□□□□□ -1.94
SEC23A-207ENST00000554615 TMEM150CB9EJG8 249 aa2.95□□□□□ -1.94
SEC23A-207ENST00000554615 MKRN2OSH3BPM6 223 aa2.95□□□□□ -1.94
SEC23A-207ENST00000554615 GOSR2O14653 212 aa2.95□□□□□ -1.94
SEC23A-207ENST00000554615 HSD17B6O14756 317 aa2.95□□□□□ -1.94
SEC23A-207ENST00000554615 TSPAN4O14817 238 aa2.95□□□□□ -1.94
SEC23A-207ENST00000554615 TMPRSS2O15393 492 aa2.95□□□□□ -1.94
SEC23A-207ENST00000554615 YPEL1O60688 119 aa2.95□□□□□ -1.94
SEC23A-207ENST00000554615 STK17BO94768 372 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms